Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4863 |
Symbol | |
ID | 4451736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 1864449 |
End bp | 1865993 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639696919 |
Product | carbohydrate-selective porin OprB |
Protein accession | YP_838490 |
Protein GI | 116692957 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3659] Carbohydrate-selective porin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCCCG CATCACGTTC CCGTTTCCTC AGCCTAACTA ATCAAACTGC CAACGGAACC CGAATGAAGC AACTCTCTTC CGTCCCGCGC AAGCTTCGCG TCGATGCGCT CGCCGCGCTG CTGCTGTCGC TCGCCGCCGC CTCCGCATTC GCGCAAGCGT CGGCTCCCGC CACCGAACCG GCGGCCGGCA CGAACGATGC CGCCGCCCCC GCCCAACCGG CCGCCGATGC TGCCACGCCC GCTCCCATCG GCTTGTGGGA ACGGTCGAAC CTGCTCGGCA ACATGGGCGG CCTGCGCGAC GTGCTCGACG AACACGGCGT CACGCTGAGC CTGCAGGAAA CCAGCGAGTA CCTGTACAAC ACGTCCGGCG GCACAGGGCG CGGCGGCGCG TACCAAGGGC TCACGCAATT CGGTTTCGAC GTCGACACCG GCAAGGCGAT CGGCCTGCCG GGCGGCACGT TCAACGTGTC GGGGCTGCAG ATCCACGGCA CCAACCTCAC GCAGCGCTAC CTGCAGACGC TGCAGACCGC GACCGGCATC GAGGCCAATT CGACCACGCG CCTGTGGGAG CTCTGGTACC AGCAGTCGCT GCTCGACGGC AAGGTCGACG TGAAAGTCGG CCAGCAGAGC GTCGACCAGG AATTCATGGT GAGCCAGAAC GCGGCGACGT TCATGAACGC GACGTTCGGC TGGCCCGTGC TGCCGTCCAC CGACCTGCCG TCCGGCGGCC CTGCGTATCC GCTGTCGTCG CTCGGCGTGC GGCTGCGCGT GAAGCCGGCC GACGCGTGGA CCGCGATGGT CGGCGTGTTC GACGGCAACC CGGCCGGCCG CAGCGACGGC GACGCGCAGG TGCTGAACGC GCACGGCACC AATTTCAACC TGCGCAGCGG GGCATTCGTG ATCGGCGAAG TGCAGTACGC GCTGAACGCG CCGCCGGCCG ACCCGAAGGC CCCGCAGCCG GCCGGCCTGC CCGGCACGTA CAAGCTCGGC TTCTGGTATC ACTCGCAGCA CGCGAACGAT CCGCGCTACG GCACCGACGG GTTGTCGCTC GCCGATCCGG CCAGCAACGG CATGCCCGCC ACGCATCGCG GCAACTACGG GTTCTATGCG GTCGCGGACC AGATGGTGTG GCGGCCGTCC GCCGACAGCC CGCGCTCGGT CGGCGTGTTC GCGCGCGTGA TGGGCTCGCC GGGCGACCGC AATCTCGTCG ATTTCGCGGC CAATGCGGGC GTGACGCTGA AGGCCCCGTT CGTCGGGCGC GACAACGACG TCGCCGGCAT CGCGGTCGGC TACGCGAAGA TCGGTTCGCA TGCGCGCGGC CTCGACGGCG ACACCGGCGC GTACACGACG CCCGGCTATC CGGTGCGCCG CGCGGAGACG GTCATCGAGG CGACCTACCA GTACCAGATC GCGCCGTGGT GGCAGGTGCA GGCCGACCTG CAGCACTTCT TCCGTCCGGG CGGCGGCATC CCGAACCCGA ACGCGGCCGG CGCGCGCATC GGCGACGAAA CGGTGGTCGG CGTGCGCACG ACGATCACGT TCTGA
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Protein sequence | MRPASRSRFL SLTNQTANGT RMKQLSSVPR KLRVDALAAL LLSLAAASAF AQASAPATEP AAGTNDAAAP AQPAADAATP APIGLWERSN LLGNMGGLRD VLDEHGVTLS LQETSEYLYN TSGGTGRGGA YQGLTQFGFD VDTGKAIGLP GGTFNVSGLQ IHGTNLTQRY LQTLQTATGI EANSTTRLWE LWYQQSLLDG KVDVKVGQQS VDQEFMVSQN AATFMNATFG WPVLPSTDLP SGGPAYPLSS LGVRLRVKPA DAWTAMVGVF DGNPAGRSDG DAQVLNAHGT NFNLRSGAFV IGEVQYALNA PPADPKAPQP AGLPGTYKLG FWYHSQHAND PRYGTDGLSL ADPASNGMPA THRGNYGFYA VADQMVWRPS ADSPRSVGVF ARVMGSPGDR NLVDFAANAG VTLKAPFVGR DNDVAGIAVG YAKIGSHARG LDGDTGAYTT PGYPVRRAET VIEATYQYQI APWWQVQADL QHFFRPGGGI PNPNAAGARI GDETVVGVRT TITF
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