Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4850 |
Symbol | |
ID | 4451723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 1850987 |
End bp | 1851865 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639696906 |
Product | YscJ/HrcJ family type III secretion apparatus lipoprotein |
Protein accession | YP_838477 |
Protein GI | 116692944 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4669] Type III secretory pathway, lipoprotein EscJ |
TIGRFAM ID | [TIGR02544] type III secretion apparatus lipoprotein, YscJ/HrcJ family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0000793043 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACGA TCGATTCGAC GCCGCGCATG CATGCGTGGC GCAGCCGGGC GGCGCGTGCG CTGCTCGCGG GGCTGCTCGT GCTGTTGGCC GGGTGCCAGA AGGAGCTGTA CTCGGGCCTG TCGGAGCGCG ACGCGAACCA GATGGTCGCG GTGCTCGGCG ACGCGGGCAT CAGCGCGTCG AAGGACAACG ATGCGCGCGA CACGTCGGAC CGCAACGCGT GGCTCGTGAG CGTCGCGGAC GGCGACATGC AGGCGGCGCT CACGGTACTG CAGGCGAACG GACTGCCGAA GCCGAGCTAT GCGAGCCTCG GCGAGCTGTT CCAGAAGCAG GGCCTCGTGT CGACGCCGGC CGAGGAGCGC GTGCGCTACC TGTACGGCGT GTCGCAGGAT CTGTCGCGCA CGCTGCAGGA CATCGAGGGC GTGGTGGTCG CGCGCGTGCA GGTCGTGATT CCGGAGAACG ATCCGCTCGC GGACAAGATC AAGCCGTCGT CGGCCGCGGT GTACATCCGC TACCGGCCGG GCGTCGACCT GCGCGCGATG GCGCCGATGG TCAAGGATCT CGTCGCGCAC AGCATCGAAG GGCTGCAGTA CGACAACGTG TCGCTGTTCC TGCAGCCGGC CGCCGCGCGC GCGACGCGCG TGGACGGGAT CGGCAGTGCG GTGTCGGACA TCCTGCGGCT GCGCTCGCCG CTCGGCTGGC TCGTGTTCGC GCTGATCCTG CTGACCTGCG CGGTGATCGC GCTGTCGGCC GCGCGGCGCG GGATGTTCGG CGCGCGGCTT GCGGGCCTGC TCGGTGCGTC GCGCGGGGCG AGCGGTGCGA CCGCGCAGAA CGCTGGCGGC GGGTTGCGTA CGCCGGACGG CGCGCGCGAC GGCGCATGA
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Protein sequence | MTTIDSTPRM HAWRSRAARA LLAGLLVLLA GCQKELYSGL SERDANQMVA VLGDAGISAS KDNDARDTSD RNAWLVSVAD GDMQAALTVL QANGLPKPSY ASLGELFQKQ GLVSTPAEER VRYLYGVSQD LSRTLQDIEG VVVARVQVVI PENDPLADKI KPSSAAVYIR YRPGVDLRAM APMVKDLVAH SIEGLQYDNV SLFLQPAAAR ATRVDGIGSA VSDILRLRSP LGWLVFALIL LTCAVIALSA ARRGMFGARL AGLLGASRGA SGATAQNAGG GLRTPDGARD GA
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