| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4840 |
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| Symbol | |
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| ID | 4451312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | + |
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| Start bp | 1828194 |
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| End bp | 1828868 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639696896 |
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| Product | type III secretion system protein |
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| Protein accession | YP_838467 |
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| Protein GI | 116692934 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4790] Type III secretory pathway, component EscR |
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| TIGRFAM ID | [TIGR01102] type III secretion apparatus protein, YscR/HrcR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00372455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00110114 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGGCAACC TGCCGAATCC GGTCGCGCTG ATCGCGGTGA TCGCCGCGCT CGGCATCGCG
CCGTTCGCGG CGCTGATGGT GACGAGCTAC ACGAAACTCG TGGTCGTGCT CGGCCTGCTG
CGCTCCGCGC TCGGCATCCA GCAGGTACCG CCGAACCTCG TGCTGAACGG CATCGCGCTG
ATCCTGTCGC TGTTCATCAT GGCGCCTGTC GGGATGTCGA TCCGCGACGC GCTGCAGGCG
CGCCACTTCG ATGCGTCGGG GCAGTTGTCG ACCTCGGACA TCGGCGCGCT CGCCGACGCG
GCGCTGCCGC CGATCAAGGA TTTCCTCGTG TCGCATACGC GCCAGCGCGA CCGCGAATTC
TTCGTGCGCA CCGCGACGTC GGTCTGGCCG AAGAACCGCG CGGACGGCAT CAAGGACGAC
GACCTGCTCG TGCTGGTGCC GAGCTTCACG CTCGCCGAGC TGACGAAGGC GTTCCAGATC
GGCTTCGTGA TCTACATCGT GTTCATCGTC GTCGACCTGC TGGTCGCGAA CATCCTGCTG
GCGCTCGGGA TGCAGATGAT CTCGCCGACG ACGATCTCGG TGCCGTTCAA GCTGCTGCTG
TTCGTCGCGC TCGACGGCTG GTCGCTGCTC GTGCACGGGC TCGTGCTGTC GTATCGGGTC
GCCGGAGCCG GATGA
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| Protein sequence | MGNLPNPVAL IAVIAALGIA PFAALMVTSY TKLVVVLGLL RSALGIQQVP PNLVLNGIAL
ILSLFIMAPV GMSIRDALQA RHFDASGQLS TSDIGALADA ALPPIKDFLV SHTRQRDREF
FVRTATSVWP KNRADGIKDD DLLVLVPSFT LAELTKAFQI GFVIYIVFIV VDLLVANILL
ALGMQMISPT TISVPFKLLL FVALDGWSLL VHGLVLSYRV AGAG
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