| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4746 |
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| Symbol | |
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| ID | 4453555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | - |
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| Start bp | 1730258 |
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| End bp | 1731460 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639696802 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_838373 |
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| Protein GI | 116692840 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00758562 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTCTCCT TTTCCCTACG CAGAACCTCG CCATTGGGCG CGGCCTGCGC CCTGTTGCTG
GCGTTGTCGG GCTGTCACGA CGGCAAAGGC ACATCGTCGG CCCAGCCGCT TCCCGAAGTG
GGCGTCGCCA CCGTCGCGCC GCGTACCATC CGCCTCGCGG ACGAATTCAA CGGGCGCGTC
GAAGCGGTGG ACGCCGTCGA ACTGCGGCCG CGCGTGAGCG GCTACCTGCA GCGTGTCGCG
TACAAGGAGG GCGACGTGGT CGCGCAGGGC GCGTTGCTGT TCGAGATCGA TCCGCGCCCG
TACCGGATCG CGCTCGACCG GGCGAATGCG CAGCAGCAGC GCGCCCGCGC GGCCGCGAGC
CTCGCGAACG TGCAGTTGAA GCGCGTGCAG ACGCTGATCG ACGCGCATGC GACGTCGCAG
GAAGAACTCG ACAACGCGCG CGCCACCGCG GAGCAGGCGC GTGCCGATCT GCAGGCGGCC
GATGCGGCCG TGGCCGACGC GAAGCTCAAT CTCGGCTTCA CCGAAGTGCG CGCGCCGATC
GCGGGCCGGG TCGGCCGTGC GGTCGCGACC GTCGGCAACC TCGCGCGGGC GGACGACACG
CTGCTGACGA CCGTCGTGTC GCAGGACCCC GTCTACGTGT ATTTCGATTG CGACGAGCAA
AGCTACCTGC GCTACAACGC GCGGCGCGCC GATCCGACGC ATCGCGCGAT CGGCGCCGAT
CCGGTGCGCG TCGGCCTCGC GAACGAGACG GGCTTCCCGC ATGCGGGCAC CGTCGATTTC
CTCGACAACC GGCTCGATCC GCAAACCGGC ACGATCCGCG CCCGCGTGCG GCTGCCGAAT
GCGGACCATA CGTTCACGCC GGGCCTCTAT GCGCGCGTGC AGCTCGTCAG CGGCCGCGAC
CAGGACGCTT TGCTGGTCGA CGACAAGGCG GTGCTGACCG ACCAGGACCG CAAGTACGTA
TACGTGATCG GCCCGGGCGA CAAGGCGCTG CGCCGCGACG TGACGATCGG CCGCGAACTC
GACGGCGAGC GGATCGTCGA GAAGGGGTTG CAGTCGGGCG ACCGCGTGGT GGTGGACGGC
GTGCAGCGCA TCTACTATCC GGGCGCGCAG GTGAAGCCGA AGGCGCTGCC CGCACGCGCC
GCGGCGGACC CCGGCGCCGG CACGCAGGCC GTGGCCGATG CCGGCGCGCC TGCCGCGCAC
TGA
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| Protein sequence | MLSFSLRRTS PLGAACALLL ALSGCHDGKG TSSAQPLPEV GVATVAPRTI RLADEFNGRV
EAVDAVELRP RVSGYLQRVA YKEGDVVAQG ALLFEIDPRP YRIALDRANA QQQRARAAAS
LANVQLKRVQ TLIDAHATSQ EELDNARATA EQARADLQAA DAAVADAKLN LGFTEVRAPI
AGRVGRAVAT VGNLARADDT LLTTVVSQDP VYVYFDCDEQ SYLRYNARRA DPTHRAIGAD
PVRVGLANET GFPHAGTVDF LDNRLDPQTG TIRARVRLPN ADHTFTPGLY ARVQLVSGRD
QDALLVDDKA VLTDQDRKYV YVIGPGDKAL RRDVTIGREL DGERIVEKGL QSGDRVVVDG
VQRIYYPGAQ VKPKALPARA AADPGAGTQA VADAGAPAAH
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