| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4676 |
|---|
| Symbol | |
|---|
| ID | 4451380 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 1661122 |
|---|
| End bp | 1662027 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639696732 |
|---|
| Product | metal-dependent hydrolase |
|---|
| Protein accession | YP_838303 |
|---|
| Protein GI | 116692770 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3687] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.170108 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.216516 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGACAC CGAACATGAT GCCCGTGCGG CGCGACATCC GTTTCGCGCT GCCCCCCGAA
CGCGCGAAGG ACTGGCACGT GCAGGGCGTG CCGGTCACGC ACTTCATGAA TGCGCTGTCG
CTGCTGTTCC CGGCCGGCGA ACGCTTCTTC ATGGATTCGG TGCGCAACTA CCGCGACCGG
ATCGAGGACC CCGAGCTGAA GAAGCAGGTG ATCGGCTTCA TCGGCCAGGA AGCGATGCAC
ACGCGCGAGC ACATCGAGTA CAACGACCTG CTGCAGGCGT CCGGCCTGCC CGCGCACAAG
CTCGACAAGC GCCTGTGGAC GATCCTCGGC TGGTTCAAGA AGGTGCTGCC GCACTCGATG
CAGCTGGCGA TCACGATCGC GCTCGAGCAC TACACGGCGA TCCTCGCGAA CCAGTTGCTG
TCGGGCCACG AACACCGGAT CGACGGCTCG GTCGAGGGCT ACCAGCAGAT GTGGATGTGG
CATGCGATGG AGGAAACCGA GCACAAGGCG GTGTCCTACG ACGTGTGGCG CACCGTGATG
AAGCCGGGCC TCGGCAGCTA CCTGCTGCGC ACCGGCACGA TGCTGACGAC GACCGTATTC
TTCTGGGCCA TCGTGTTCGA CTTCCACGTG CGGCTGATGC GCGCGCACCG TCGAGAACAC
GGCAAGTTCG GCGGCATGTG GCGCCTCGTG AAGTATCTGT ACAGTCCGAA GAACGGCGTG
TTCCCGAGCA TCGCGCGCGA ATGGCTCGAC TACTTCCGTC CGGGCTTCCA CCCGTGGGAT
CACGACAACC ATCAATACCT GCAGGAGCTC GACACGCTGC TCGAGAACAT CGACGCGACC
AACGCGCGCT ATGCGGCGCA AGCCGCCCCG CGCCGCGTGC CGCTGCATTC GGTCGCGCAG
GCATGA
|
|---|
| Protein sequence | MMTPNMMPVR RDIRFALPPE RAKDWHVQGV PVTHFMNALS LLFPAGERFF MDSVRNYRDR
IEDPELKKQV IGFIGQEAMH TREHIEYNDL LQASGLPAHK LDKRLWTILG WFKKVLPHSM
QLAITIALEH YTAILANQLL SGHEHRIDGS VEGYQQMWMW HAMEETEHKA VSYDVWRTVM
KPGLGSYLLR TGTMLTTTVF FWAIVFDFHV RLMRAHRREH GKFGGMWRLV KYLYSPKNGV
FPSIAREWLD YFRPGFHPWD HDNHQYLQEL DTLLENIDAT NARYAAQAAP RRVPLHSVAQ
A
|
|---|
| |