Gene Bcen2424_4595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4595 
Symbol 
ID4451334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1568723 
End bp1569499 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content70% 
IMG OID639696651 
ProductABC transporter related 
Protein accessionYP_838222 
Protein GI116692689 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.551817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.570129 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACG TCGATCACGT ATCGATCCGT TTCCCGACCC GCACGGGTCA CGTCGACGCC 
GTGCGCGACG CGAGCTTCGC GGTGCGCGAC GGCGAAGTGT TCGGGCTGGT CGGCGAATCG
GGCTCCGGCA AGTCGACGCT GCTGCGTGCG CTGACGGGCC TCGTGCCGCT CGCGTCCGGC
AGCCTGTCGA TCGATGGCCG TCCGGTCGGC GGCACGCCCG ATCGCGCGTT CCGCCGTCAC
GTGCAGATGG TGTTCCAGGA CCCGTACGCG TCGCTGCATC CGCGCTTCAC GGTCGACCAG
ACGCTGCGCG AGCCGCTGTC GATCCATGCG ATCGGCGACG CCGATGCGCG GATCGCCCGC
GCGCTCGCCG AGGTCGGCCT CGGCCCCGCG TTCCGCTTCC GCTACCCGCA CCAGTTGTCG
GGCGGCCAGC GGCAGCGCGT GGCGATCGCG CGCGCGCTGA TCGTCGAGCC GCGCGTGCTG
CTGCTCGACG AGCCGACGTC CGCGCTCGAC GTATCGGTGC AGGCCGAGAT CCTGAACCTG
CTGCGCCGCC TGCATCGCGA ACGCAACCTG ACGATGATCC TCGTCAGCCA CAACCTCGCG
GTGATCGGCT TCCTGTGCCA GCGCGTCGCG GTGATGCAGC ACGGCGAGAT CGTCGAGCAG
TTGCGGATCG AGGACGTGCG GGCCGGGCAG GTCGCACGCG ACTACACGCG TACGCTGCTG
AACGCGACCG AAGGCTATCG CCGCCTCGAC CCGGTTGCCG ACGCGCCTGC CAAGTGA
 
Protein sequence
MIDVDHVSIR FPTRTGHVDA VRDASFAVRD GEVFGLVGES GSGKSTLLRA LTGLVPLASG 
SLSIDGRPVG GTPDRAFRRH VQMVFQDPYA SLHPRFTVDQ TLREPLSIHA IGDADARIAR
ALAEVGLGPA FRFRYPHQLS GGQRQRVAIA RALIVEPRVL LLDEPTSALD VSVQAEILNL
LRRLHRERNL TMILVSHNLA VIGFLCQRVA VMQHGEIVEQ LRIEDVRAGQ VARDYTRTLL
NATEGYRRLD PVADAPAK