| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4573 |
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| Symbol | |
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| ID | 4453479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | + |
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| Start bp | 1539349 |
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| End bp | 1540776 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639696629 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_838200 |
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| Protein GI | 116692667 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.94055 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGACC CACGCATCCA GCCGGCGCCG GGCCGCGCGG CCGGCCGGCT CGACCCGTCG
ATCTGGAAAG TCAGCGCGGT CGCGACGCTC GGTTCGCTGC TGTCGCAGCT CGACGCGACG
ATCGTCAACG TGTCGCTGTC GAGCCTCGCG ACCGATCTGC ATGCCAGCCT GGCGACGATC
CAGTGGGTGA CGAGCGGCTA CCTGCTCGCG CTGACGCTGG TGCTGCCGCT GAGCGGCTGG
CTCGTCGATC GCATCGGCGC GAAGGCGCTG TACCTGTGGT GCTTCTCGGC GTTCACGCTT
ACGTCGGCGC TGTGCGGGCT CGCATGGTCC GCGCCGTCGC TGATCGTGTT CCGCGTGTTG
CAAGGCGTCA GCGGCGGCTT GCTCGCGCCG ATGGCGCAGA TGATGATCGC GCGCGTCGCC
GGTCGGCAGA TGGCGCGCGT GATCGGCTAT GCGGCGGTGC CGGTGCTGCT CGCGCCGATC
CTCGGCCCGG TCGTGGCCGG CGCGATCCTG CAGCACGCGT CGTGGCGCTG GCTGTTTCTG
GTGAACCTGC CCGTCGGCGC GCTCGCGCTC GCACTGGCCG CGCGCTTCCT GCCTGGCGAC
CGGGACGATG CGCCGCGGCG CGCACTCGAC TGGATCGGCC TCGCGTTGCT GTCGCCGGGC
CTCGTGCTGT TCCTGTACGG CGTCGAGCGG ATCGGCTCGG TGCCCGGCAT CGCGGCGGTC
GCGGGTTCGG CGCTGCTGCT CGTCGCGTTC CTGCGCGTCG AGCGCCGCCA GCGCGAACAT
GCGCTGATCG ATCTCGCGCT GTTTCGCTCG CGCGTGTTCG GTGCGGCAGC CGGCACGCAG
TTCCTGTCGA ACGGCGCGCT GTATGCAGGC CAGATGCTGA TTCCGGTGTT CCTGATCCAG
GCATGCGGGC GCTCGCCGGG CGAGATGGGC TGGCTGCTCG CGCCGCTCGG GCTCGGCATG
CTCGTCACCT ATCCGTCGAT GGGCGCGCTG ACGAGCCGGT TCGGCGTACG CCGGCTGGCC
GCCGCCGGTG CGTTGCTCGC ACTCGTCGCC ACGCTGCCGC TCGTGTTCCT CGCGCTGACC
GGCTACGATC CGCGCGTGCT CGTCCCGGCG CTGTTTCTGC GCGGCATGGG CCAGAGTGCG
ATCGGCGCGC CGTCGATCGC CGCCGCGTAT GCATCGGTCG AACGCCGCGA CCTGCCGATG
GCGACCACGT CGCTCAATAT CGTGCAGCGG CTCGGCGGCC CGACGTTCAC CACGCTATGC
ACGCTGTTCC TCGCGTGGCG GCTGCAGGCC GAAGCGGCGT CGGTCGGCGG CACGCCGGCC
GTCGCGTATG CATGGGCGTT CGGCCTGCTG TGCGCGCTGC ATGCGGCGAG CTTCGCGACG
ACGCTGCGGC TGCCGTTGCG CTCGGCCGGT GCAGGCGGCG GCGACTGA
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| Protein sequence | MSDPRIQPAP GRAAGRLDPS IWKVSAVATL GSLLSQLDAT IVNVSLSSLA TDLHASLATI
QWVTSGYLLA LTLVLPLSGW LVDRIGAKAL YLWCFSAFTL TSALCGLAWS APSLIVFRVL
QGVSGGLLAP MAQMMIARVA GRQMARVIGY AAVPVLLAPI LGPVVAGAIL QHASWRWLFL
VNLPVGALAL ALAARFLPGD RDDAPRRALD WIGLALLSPG LVLFLYGVER IGSVPGIAAV
AGSALLLVAF LRVERRQREH ALIDLALFRS RVFGAAAGTQ FLSNGALYAG QMLIPVFLIQ
ACGRSPGEMG WLLAPLGLGM LVTYPSMGAL TSRFGVRRLA AAGALLALVA TLPLVFLALT
GYDPRVLVPA LFLRGMGQSA IGAPSIAAAY ASVERRDLPM ATTSLNIVQR LGGPTFTTLC
TLFLAWRLQA EAASVGGTPA VAYAWAFGLL CALHAASFAT TLRLPLRSAG AGGGD
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