| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4536 |
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| Symbol | |
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| ID | 4452147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | - |
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| Start bp | 1494942 |
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| End bp | 1495973 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639696592 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_838163 |
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| Protein GI | 116692630 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.891615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.276008 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACCT ACACCCGGCG GCGCTTTCTG CAGACGGTGT CCGCCGCCAC GCTCGCGGCC
GCGGGCGGCT TGCCGGAAAG CGTGCGCGCG CAGCAGCCGG TCGTCACGCT GCGCTGCTCG
TCGTCGATGC CGGCCGACCA GAACGCCGCG CACTACGTGT GGTACGAGCG TCTCGCCGCG
AACCTGAAGG CGAGCGTGGG CGACGCGATC CGGGTCGACT ACTTTCCGAA CAGCCAGCTC
GGCAAGGAAA GCGACGTCGT GCAGCAGGTC AAGATCGGCG CGATCGACAT GATGATCGCG
GGCTCGTCGA TCTGGGCCAC GGTCGCGCCG GAGCTCGGGA TGCTCGATCT CGGCTACCTG
TTCGACAGCT ACGCGCACGT CGCGAAGGCG CTCGACGGCT CGGTCGGCAC GAGCCTGAAC
GCGCTGCTGC AAAAGCGCGC GGGATGCTCG GTGCTGACCT GGGGCTCGCA TTTCGGCGGG
CGCTGCGTGT TCACGAAGCA GCCGGTGACG GCGCTGTCCG GCCTGAAGGG GACGAAGCTG
CGCGTGCTGC CGACGCCCGC GTTCATGGAT ACCTTCAAGG CGATGGGCGC GGTGCCGACG
CCGATTCCGT TCGGCGAGCT GTACATGGCC GTGCAGACGG GCGTCGTCGA CGGTCTCGAA
CACGATCCCG CCACGGTGCT CGCGAGCCGC TTCGACGAGA TCGTGAAGTC GTGCTGGCAA
TCGCGCCACG TGTTCGCGGC GATGACCGTC GTGATGGGGC GGCGTGCGCT CGACCGGATT
CCGGCCAATC TGCGGCCCGC CTTCGACCGC GCGGTGGCCG ACGCGACCGT GCAGCAGCGC
GCGATTGCCG CGCAGAAGGC CGCGCAGGCG GAGCAGGCGC TGAAGCAGCG CGGCATGGCG
TTTTACCCGC TGGCCGATGG CGAGCGCGCG GCGCTGCGGC AGACGATGCA AGACCGCCTG
TATGCGGCGT TCGCGAAGCA GTATCCGGCC ACCGCGCCGC TGTTTCCGGC GATTGCCGCC
GCGCGGGGGT GA
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| Protein sequence | MNTYTRRRFL QTVSAATLAA AGGLPESVRA QQPVVTLRCS SSMPADQNAA HYVWYERLAA
NLKASVGDAI RVDYFPNSQL GKESDVVQQV KIGAIDMMIA GSSIWATVAP ELGMLDLGYL
FDSYAHVAKA LDGSVGTSLN ALLQKRAGCS VLTWGSHFGG RCVFTKQPVT ALSGLKGTKL
RVLPTPAFMD TFKAMGAVPT PIPFGELYMA VQTGVVDGLE HDPATVLASR FDEIVKSCWQ
SRHVFAAMTV VMGRRALDRI PANLRPAFDR AVADATVQQR AIAAQKAAQA EQALKQRGMA
FYPLADGERA ALRQTMQDRL YAAFAKQYPA TAPLFPAIAA ARG
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