| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4530 |
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| Symbol | |
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| ID | 4453504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | - |
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| Start bp | 1486782 |
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| End bp | 1488338 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639696586 |
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| Product | 3-hydroxy-acyl-CoA dehydrogenase |
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| Protein accession | YP_838157 |
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| Protein GI | 116692624 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02279] 3-hydroxyacyl-CoA dehydrogenase PaaC |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0618004 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.919532 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTTT CCTCTGCACA TTCGGTGAAC TCGGGCGCGC TCGCGCCGTC GGCCGTCGTC
GGCGTGATCG GCGCCGGCGC GATGGGCGCG GGCATTGCGC AGGTCGCGGC GGCGGCCGGC
CATGCGGTGC TGCTGTACGA CCTGAACGAA GCAGCCTGCG ACAAGGCGCT GGCCGGCATC
CGCGCGCAGT TCGCGCGGCT GGCGGAGAAG GGCCGGCTCG AACCGGCGCA GGCCGACGCA
GCCGGCAACC GGCTCCGCGC GGTGCGCGCG CTGGCCGATT TCGCGGGCGC CGCGCTGATC
GTCGAAGCGG CGGCCGAACG GCTCGACGTG AAGCGCGAGA TCTTCGCGAC CCTCGAACGT
CATGTCGACG ACGCGTGCGT GCTGGCGACC AACACGTCGT CGATCTCGAT CACGTCGATC
GCGGCCGGGC TGCGCGTGCC GCAGCGCGTC GCCGGCCTGC ATTTCTTCAA TCCGGCGCCG
CTGATGGCGC TCGTCGAGGT GGTCAGCGGG CTCGCGACCG CGCCCGAGGT CGCCGGGATG
CTGCATGCGA CCGCCGCCGC GTGGGGCAAG CAACCGGTGA TGGCGAAATC GACGCCGGGC
TTCATCGTGA ACCGCGTCGC ACGGCCGTAT TACGCGGAGG CGCTACGCGT ACTGAACGAG
CAGGGCGGCA CGCCGGCCAC GATCGACGCG GTGATGCGCG AAGCTGGCGG CTTCCGGATG
GGGCCGTTCG AGCTGATGGA CCTGATCGGC CACGACGTGA ATTTCGCGGT GACCGAGTCG
GTGTTCCGCG CGTACTTCAA CGACCCGCGC TACACGCCGT CGCTGATCCA GCAGGAACTC
GTGAACGCGG GCTTCCTCGG GCGCAAGTCC GGGCGCGGCT TCTATTCGTA TGCGGACGGC
GCGACGCCGC CCGCGCCCGA TCTCGAGCCG CCGCGCGCCG CGCCGGCCGA CGTCGTGCTG
TTTGCGCAGG AAGGCCCGGC CGCCGCGCTG CACACGCGCC TGGCCGAACG GATCGAAGGC
GCGCGGCGCA ACGGCGCGCA TGCGGACGAA CTGCTCGCCG TGGCCGGCCG CGCGTCGATC
GCGCTGACCG ATGGCCGCAC CGCGACCGCG CGCGCCGCCC AAACGGGCGT GGCCGACCTC
GTGCTCGTCG ACCTGGCGCG CGATTACGCG CAGGCCGGGC TCGTCGCGCT GACGCGTGCG
CTCCAGTGCA ACGACGCCGC GTATGCGGAC GCGGTCGGCC TGTTCCAGCA GGCGGGCTTT
CGCGTGGTCG GCATCGCGGA CGTGCCGGGA ATGGTCGCGA TGCGCACCGT CGCGATGCTC
GCGAACGAGG CGGCCGACAC GGTCAACCAG GGCGTGTGCT CGCCGGCCGA TCTCGATCTC
GCGATGGAGA AGGGCGTGAA CTATCCGTGC GGCCCGCTCG CGTGGGCCGA TGCGATCGGG
ATCGGCCGCG TGCATCGCGT GCTGTCGAAC CTGGCGGCGA GCTACGGCGA GGACCGCTAT
CGCGTGTCGC CGCGCGTCGC CGCGCTGCAC GCGGCCGGCC GCACGTTCCG GTCGTAG
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| Protein sequence | MAVSSAHSVN SGALAPSAVV GVIGAGAMGA GIAQVAAAAG HAVLLYDLNE AACDKALAGI
RAQFARLAEK GRLEPAQADA AGNRLRAVRA LADFAGAALI VEAAAERLDV KREIFATLER
HVDDACVLAT NTSSISITSI AAGLRVPQRV AGLHFFNPAP LMALVEVVSG LATAPEVAGM
LHATAAAWGK QPVMAKSTPG FIVNRVARPY YAEALRVLNE QGGTPATIDA VMREAGGFRM
GPFELMDLIG HDVNFAVTES VFRAYFNDPR YTPSLIQQEL VNAGFLGRKS GRGFYSYADG
ATPPAPDLEP PRAAPADVVL FAQEGPAAAL HTRLAERIEG ARRNGAHADE LLAVAGRASI
ALTDGRTATA RAAQTGVADL VLVDLARDYA QAGLVALTRA LQCNDAAYAD AVGLFQQAGF
RVVGIADVPG MVAMRTVAML ANEAADTVNQ GVCSPADLDL AMEKGVNYPC GPLAWADAIG
IGRVHRVLSN LAASYGEDRY RVSPRVAALH AAGRTFRS
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