Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4509 |
Symbol | |
ID | 4452837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 1464460 |
End bp | 1465221 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639696565 |
Product | uroporphyrin-III C-methyltransferase |
Protein accession | YP_838136 |
Protein GI | 116692603 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0007] Uroporphyrinogen-III methylase |
TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.000349091 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGACAG GCAAAGTCAC GCTGCTGGGC GCCGGCCCCG GCGATCCCGA TCTCCTTACG CTGAAGGCGG TGAAGGCACT GGCCGCCGCC GACGTGCTGC TGCTCGACGA TCTCGTCGCG CCCGGCATCG TCGAACTCGC GCCGCGGGCG CGCGTGATCC GCGTCGGCAA GCGCGGCGGC TGCCGCTCCA CGCCGCAGGC GTTCATCGAG AAACTGATGC GCCGCTACGC GCTGCGCGGC GCGCACGTGG TGCGCGTGAA AGGCGGCGAC GCGCTGCTGT TCGGGCGCGC CGGCGAGGAA CTCGCGACGC TGCGCGCGGC CGCGATTCCG GTCGAGATCG TCAACGGCAT CTCGTCGGGA TTCGCCGCCG CCGCGAGCCT CGGCATCTCG CTCACGCACC GCGAGCACTG CCAGGGCGTC ACGTTCGTCA CCGCGCACCG CCAGGATCAT GGCGAACCCG ACTGGGCACG GCTCGCGGCG ACCGGCACGA CGCTCGCGAT CTACATGGGG ATGAGCCGCG TCGACAGCAT CGCGGCGGGC CTGCTCGCCG CGCTGCCCGC GTCGACGCCG GCGGCGGCCG TGCAATGGGC CGGCACGCCC GACGAACGTC GCTGGACCGG CACGCTGGGC ACGCTCGCGT GCGGCATCGA AGCCGAGCGG CTGGGCAGCC CGGCCGTGAT CCTCGTCGGC GGCGCGATCG GCGCAGCAGC CGCGCAAGGC GCGAGCACGG CAACCGGCGC GGCGCTTGCG CGGGCCGCCT GA
|
Protein sequence | MTTGKVTLLG AGPGDPDLLT LKAVKALAAA DVLLLDDLVA PGIVELAPRA RVIRVGKRGG CRSTPQAFIE KLMRRYALRG AHVVRVKGGD ALLFGRAGEE LATLRAAAIP VEIVNGISSG FAAAASLGIS LTHREHCQGV TFVTAHRQDH GEPDWARLAA TGTTLAIYMG MSRVDSIAAG LLAALPASTP AAAVQWAGTP DERRWTGTLG TLACGIEAER LGSPAVILVG GAIGAAAAQG ASTATGAALA RAA
|
| |