| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4479 |
|---|
| Symbol | |
|---|
| ID | 4452633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 1431150 |
|---|
| End bp | 1431944 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639696535 |
|---|
| Product | RNA polymerase sigma factor |
|---|
| Protein accession | YP_838106 |
|---|
| Protein GI | 116692573 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCACG AACCGGATGT CGATGAAACC GACACGGCCG ACACCGTGTG CGATGCCGGG
CGCGACGCGC GCGGCGATGC CGAACCGTCG GAACCGCCGG CATGGCGCCG TCCGGTGATG
GCCCGACGCA TGCAAGGAGA GCACGACGAT GAGCTTCAGC CGGGCGGTGG GGATACCTGC
CGTAACAGGG CGGCGCCCGC GCGCCGCACG ACGGAGCAGG CGGCGTTGAA CGATCGCGGC
GACCGCGATC CGGACGCGGA ACTCGTCGCG CGCGTCGGCG CGCGCGATGC GTCGGCGGTG
CGCGTGCTTG TCGCGCGCAA GCTGCCGCGG CTGCTCGCAT TGGCGACGCG CATGCTCGGC
GACCGGAACG AAGCCGAGGA CGTCGCGCAG GAGACCTTCT TGCGAATCTG GAACCAGGCG
CCGCGCTGGC GCGAAGGCGA AGCCCGCTTC GACACGTGGC TGCATCGCGT CGTGCTGAAC
CTGTGCTACG ACCGGTTGCG CGGCCGGCGC GAGGAGCCCG TCGACACGCT GCCCGACGTG
CCGGATACGC AGCCGGAGCC GGCCGCGCAT GCGGAACTGC GTTCGCGCGA CGCACGCGTG
CGGCAGGCGC TGGCCGCGTT GCCGCCGCGG CAGCGGGAAG CGCTGGTGCT CCAGTACTAT
CAGGAAATGT CGAACGTGGA AGCGGCCAAC CTGATGGGCA TCACCGTCGA TGCGCTGGAA
AGCCTGCTCG CCCGTGCGCG GCGCAACCTG CGCGCGCAAC TGGCCGGCGA TCCACCTAGC
GAGGACAAGC GATGA
|
|---|
| Protein sequence | MRHEPDVDET DTADTVCDAG RDARGDAEPS EPPAWRRPVM ARRMQGEHDD ELQPGGGDTC
RNRAAPARRT TEQAALNDRG DRDPDAELVA RVGARDASAV RVLVARKLPR LLALATRMLG
DRNEAEDVAQ ETFLRIWNQA PRWREGEARF DTWLHRVVLN LCYDRLRGRR EEPVDTLPDV
PDTQPEPAAH AELRSRDARV RQALAALPPR QREALVLQYY QEMSNVEAAN LMGITVDALE
SLLARARRNL RAQLAGDPPS EDKR
|
|---|
| |