Gene Bcen2424_4434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4434 
Symbol 
ID4451822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1382681 
End bp1383649 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content69% 
IMG OID639696490 
Productaliphatic sulfonate ABC transporter periplasmic ligand-binding protein 
Protein accessionYP_838061 
Protein GI116692528 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID[TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTGA GCCGAATCGT CACGGCGCTC TTGCTGGCGC TCGCCGCGCA GCCGGGCATC 
GCCAAAGACA CCGTCACGCT GCGTGTCGGT GAACAGAACT ACTTCAACAT CCAGGCGTCG
ATGGAGGCGT CCGGCGCGCT GAAGGACCTG CCTTACACGA TCGAGTGGAA GCACTTCCAG
GCCGCCGCGC CGGTGGCCGA AAGCCTGAAC GGCAACGCGA TCGACCTCGG CTTCCTCGGC
GATTCCGCGC TGCTCACGCT GGCCGCGCGC GGCGCGCCGG TCAAGGTCGT CGCGGTGTCG
CGGCAGAGCC TCGACGGCGT CGCGATCCTC GTGCCGAAGA ACTCGCCGGT GCGCACCGTG
GCCGACCTGC AGGGCAAGAC CATCGCGGTA TGGCGCGGCG CGTGGAGCCA GCAGCTCGTG
CTGCGTGCGC TCGAACACGC GGGGCTGCGC GCCGATTCGG TGAAGTACGC GTACCTGATG
CCGATCGACG CGACCAACGC GCTCGCGAAC GGCTCGGTCG ACGCGGTGTC GCTGTGGGAG
CCGTTCGTCA GCACGCTCGC ATTGCGGCAG GGCGCGCGGC CCGTGACGAC CGCGCAGGGG
CTGATGCCGG CGCTGAGCTT CGTCGCCGCG AACGAGCAGG CCGCAGCGGG CAAGCGCGCC
GAGATCACCG ATTTCCTGCG GCGTGTGGTG GTCGCGCGCC AGTGGGTCGA CAGCCATCCG
CGCGAGTACG CGGACCTGTG GGCGAAACGC GCGAATCTCG AACCCGACGT CGCGTATCGC
TGGCTCAACA ATGCCCGGCA GCGCGTCGGC CCGGTCGACG AGACGGCCGC GAAGGATGCA
CAGAATACGG CCGACTTCCT GCACAAGTCC GGCGTGATTC CGGCCGCGTA CGACACGTCG
AAGCTGCTCG ACCGCTCGTA TGCGGGCGCG TTCGCGGCGC CTGCGCAGAA GACCGCCGCC
GCGCAGTGA
 
Protein sequence
MLLSRIVTAL LLALAAQPGI AKDTVTLRVG EQNYFNIQAS MEASGALKDL PYTIEWKHFQ 
AAAPVAESLN GNAIDLGFLG DSALLTLAAR GAPVKVVAVS RQSLDGVAIL VPKNSPVRTV
ADLQGKTIAV WRGAWSQQLV LRALEHAGLR ADSVKYAYLM PIDATNALAN GSVDAVSLWE
PFVSTLALRQ GARPVTTAQG LMPALSFVAA NEQAAAGKRA EITDFLRRVV VARQWVDSHP
REYADLWAKR ANLEPDVAYR WLNNARQRVG PVDETAAKDA QNTADFLHKS GVIPAAYDTS
KLLDRSYAGA FAAPAQKTAA AQ