Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4178 |
Symbol | |
ID | 4453351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 1090500 |
End bp | 1091837 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639696236 |
Product | amino acid permease-associated region |
Protein accession | YP_837807 |
Protein GI | 116692274 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.143517 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCGCG CGAACTTCCG CGTGTCGCCC ACACAAAACA AGACCTTCCG GAGACTGCCG CTCATGCCTT CGCATGCCGA TTCGCCCGCT GCCCATCATG CGGGTTCGCT GACCATTTTC CAGGGCGCCG CGCTCTATAT CGGCGCGGTG CTCGGCACCG GCGTGATCGC GCTGCCCGCG CTCGCCGCCG ACGTCGCCGG GCCCTCCTCG CTGCTCGCGT GGGCCGCGCT CGTCGTGCTG TCCGGGCCGC TCGCGGCCAC CTTCGCCGCA CTCGGCGCCC GCTATCCCGA TGCGGGCGGC GTGTCGACCT ACGCGCGGCG CGCATTCGGC CCGAAGGCCG CGGCCATCGT CGGCTGGTGC TTCTATTTCG CGGTGCCGGC CGGCGCGCCG GCCGCCGCGA TGTTCGGCGG CGCCTACGTC GCGGCCGTCA CGGGCGGCGG ACATACGACG GTCATCGTCA CCGCCGCCGC ACTGATCGCG ACCGTATCGG CCGCGAACGC ATTCGGCGTC ACAGTGTCGG GCCGCATGCA ACTCGTGTTG TCGGCACTGC TCGTCGCGCT GCTGCTCGCC GCGGTGCTTG CGTCCGCGCC GCATGCGCGC GCCGCGAACC TGCATCCGTT CGCCCCGCAC GGCTGGCTCG CGGTCGGCCA GGCCGCCGCG CTGCTCGTGT GGAGCTTCGC CGGCTGGGAA GCCATCACGC ACCTCGCCGC CGAATTCCGC CGGCCGGCGC ACGACATGCC GCGCTCGGCC GGCATCGCGG TCGTGGTCGT CGGGTTCCTG TATCTGTCGG TTGCGGCCGC GAGCGTGACG GTGCTCGGGC CTTCCGCGGG CGCATCGGGC GCGCCGCTCG CCGAACTGAT CGCGGGCGGC ATCGGCGGCC ATGCGCAGGT GCTGGCCGCC GCCGCCGCGC TGCTGCTCAC GCTCGGCACG ATGAACGCGT ATTTCGCCGG CGCGGCCAAG CTCGGCGCGG CGCTCGGACG CGACGGCGCG TTGCCTGCGT GGCTCGCTCA GGGCAGCCAG GTCGGCGGCG TGCCGCGTCG CAGCCTCGGC GTGATCGCGG TGCTGGCGGC CGTCGCGCTG GCCGCCACGG CGCTGTCGGA CGTCGGGCCG AAGCCGCTCG TGCTCGTGAC GTCCGGATGT TTCGTGATGG TGTACGGGCT CGGCGCGGCC GCCGCGCTGA AGCTGCTGCC GCGCGGCGGC ATCGCGTACC GCTGCGCGTG GATTTCGCTG ATTGCGGTCG CCGGGCTGTT CGTGACGACC GGCTGGTATT TCCTGTGCCC GCTGCTGCTT GCGGGCGGTG CGCTGCTTTA TCTGCAGATC ACCGGCCCGC GTCGATGA
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Protein sequence | MDRANFRVSP TQNKTFRRLP LMPSHADSPA AHHAGSLTIF QGAALYIGAV LGTGVIALPA LAADVAGPSS LLAWAALVVL SGPLAATFAA LGARYPDAGG VSTYARRAFG PKAAAIVGWC FYFAVPAGAP AAAMFGGAYV AAVTGGGHTT VIVTAAALIA TVSAANAFGV TVSGRMQLVL SALLVALLLA AVLASAPHAR AANLHPFAPH GWLAVGQAAA LLVWSFAGWE AITHLAAEFR RPAHDMPRSA GIAVVVVGFL YLSVAAASVT VLGPSAGASG APLAELIAGG IGGHAQVLAA AAALLLTLGT MNAYFAGAAK LGAALGRDGA LPAWLAQGSQ VGGVPRRSLG VIAVLAAVAL AATALSDVGP KPLVLVTSGC FVMVYGLGAA AALKLLPRGG IAYRCAWISL IAVAGLFVTT GWYFLCPLLL AGGALLYLQI TGPRR
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