Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4139 |
Symbol | |
ID | 4453007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 1049940 |
End bp | 1050860 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639696197 |
Product | dihydrodipicolinate synthetase |
Protein accession | YP_837768 |
Protein GI | 116692235 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.405813 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.104892 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCCGCA AAGCCATTCA ATGGACCGGG GTTTTCCCGG CCGTCAGCAC CCAGTTCAAG CCGGACTTTT CCCTCGACAT CGACGCCACG CACCGCGTGG TCAAGAACCT GGTGAACGAC GGCGTGTCGG GCCTCGTGGT CTGCGGCACG GTCGGCGAAA ACACGTCGCT GTCGACGAGC GAGAAGCTCC AGGTGATCGA GGCCGCGCGC GACGCGGCCG GCGGCAAGAT TCCGGTGATC GCCGGCATCG CCGAATTCAC GACCGAATTC GCGCGCAACA CGGTGCGCGA AGCGCAGCGC GTCGGCGTCG ACGGCGTGAT GGTGATGCCC GCGCTCGTCT ACTCGGCGAA GCCGCACGAA ACCGCCGCGC ACTTCCGCGC GGTCGCGACG AGCACCGACC TGCCGGTGAT GGTCTACAAC AACCCGCCGA TCTACAAGAA CGACGTGACG CCCGACGTGC TGATCGCGCT GCAGGATTGC GAGAACATCG TCTGCTTCAA GGATTCGTCG GGCGATACGC GCCGCTTCAT CGACCTGCGC AATGCGGTCG GCGATCGCTT CGTACTGTTC GCGGGCCTCG ACGACGTCGT GGTCGAGAGC ATCGCGGTCG GCGCCGAAGG CTGGGTGTCG GGCATGTCGA ACGCGTTCCC GAAGGAAGGC GAGACGCTGT TCCGCCTCGC GAAGCAAAAG CGCTTCGACG AAGCGCTCGC GCTGTATCGC TGGTTCATGC CGCTGCTGCA CCTCGACGCA CGCCCCGACC TCGTGCAGTG CATCAAGCTG TGCGAGGAGC TGGTCGGCCG CGGCAGCGCG ATCACGCGTC CGCCGCGCCT CGCGCTGCAA GGCGACACGC TCGCGGAAGT GAAGGCCATC GTCGCGAAGG CGCTCGAAAC GCGCCCGGCG CTGCCCGACG TCGGTCTCTG A
|
Protein sequence | MSRKAIQWTG VFPAVSTQFK PDFSLDIDAT HRVVKNLVND GVSGLVVCGT VGENTSLSTS EKLQVIEAAR DAAGGKIPVI AGIAEFTTEF ARNTVREAQR VGVDGVMVMP ALVYSAKPHE TAAHFRAVAT STDLPVMVYN NPPIYKNDVT PDVLIALQDC ENIVCFKDSS GDTRRFIDLR NAVGDRFVLF AGLDDVVVES IAVGAEGWVS GMSNAFPKEG ETLFRLAKQK RFDEALALYR WFMPLLHLDA RPDLVQCIKL CEELVGRGSA ITRPPRLALQ GDTLAEVKAI VAKALETRPA LPDVGL
|
| |