Gene Bcen2424_4108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4108 
Symbol 
ID4452708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1009024 
End bp1010454 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content66% 
IMG OID639696166 
Producthypothetical protein 
Protein accessionYP_837737 
Protein GI116692204 
COG category[S] Function unknown 
COG ID[COG2308] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0676564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAGAA GATCGATGAA GCCATTCGAT GAAATGCTGC AATCCGGCGA CATGGTAAGG 
GCGCCTTACG CGCGCCTGAA GCAATGGCTC GACACGCAGA ATCCTGCGAG CCTCGCCCAG
AAGGCCCACG ACGCGGAAGG CGTGTTCCGC AAGACGGGCA TCACGTTCGC CGTCTACGGC
GACGCGGAGG CCGCCGAGCG GCTGATTCCG TTCGACATCG TCCCGCGCAT CATCTCGGGG
GCGGAATGGA GCCGGCTGTC GCTCGGCATC GAGCAGCGCG TAATGGCGCT GAACGCGTTC
CTCGACGACA TTTACCACCG TCAGGAAATC GTGCGCGCGG GCATCGTGCC GAAGCACCTG
ATCGCGCACA ACGACGCGTT CATCCCCGAG ATGATCGATT TCCGGCCGCC CGGCAACGTT
TACACGCACA TCATCGGTGT CGACATCGTG CGCACCGGCG AGAACGCGTT CTACGTGCTG
GAGGACAACG CGCGCACGCC GTCCGGCGTG TCGTACATGC TGGAAAACCG CGAAACGATG
ATGCAGCTCT TCCCCGAGCT GTTCCAGCAG GTGAAGGTGC GCCCGGTCGA AACCTATCCG
CAGATGCTGC GCCAGTCGCT CGCGGCCGTG TGCCCGCCGG GCGGCAATGC CGACAACCCG
ACCATCGCGG TGCTCACGCC CGGCATCCAC AATTCCGCGT ACTACGAGCA TTCGTTCCTC
GCCGACCAGA TGGGCGTGCA CCTCGTCGAA GGCAGCGACC TGCAGGTGAT CGACGGGCGC
GTCGCGATGC GCACGACCGA AGGCTTCCAG CCGATCGACG TGCTGTACCG CCGCGTCGAC
GACGCGTTCC TCGATCCGCT GACGTTCCGC CCGGATTCGG TGCTCGGCGT GGCCGGCATC
ATGGACGTGT ACCGCGCGGG CAACATCACG ATCGCGAATG CGCCCGGCAC CGGCATCGCC
GACGACAAGG CGATCTACTC GTACATGCCG GAGATCGTCG AGTTCTACAC GGGCCGCAAG
GCGCTGCTGG AGAACGTGCC GACCTGGCGC TGCGGCGAGG CCGACAGCCT GAAGTACGTG
CTCGCGCATC TCGACGAACT GGTCGTGAAG GAAGTGCACG GCTCGGGCGG CTACGGGATG
CTGGTCGGGC CGTGCGCGTC GAAGGCCGAA CTCGAGGCAT TTTCCGCGAA GCTGCGCGCG
CGTCCCGCGA ACTACATCGC GCAACCGACG CTCGCGCTGT CCACGACGCC GATCCTGACC
GACGCCGGCC TCGCGCCGCG CCACGTCGAC CTGCGTCCGT TCGTGCTGGT GTCGGACCGG
ATCCGCATCA CGCCGGGCGG GCTCACGCGC GTCGCGCTGC AGGAAGGGTC GCTCGTCGTC
AACTCGAGCC AGGGCGGCGG CACCAAGGAC ACCTGGGTGC TGGCCGACTG A
 
Protein sequence
MERRSMKPFD EMLQSGDMVR APYARLKQWL DTQNPASLAQ KAHDAEGVFR KTGITFAVYG 
DAEAAERLIP FDIVPRIISG AEWSRLSLGI EQRVMALNAF LDDIYHRQEI VRAGIVPKHL
IAHNDAFIPE MIDFRPPGNV YTHIIGVDIV RTGENAFYVL EDNARTPSGV SYMLENRETM
MQLFPELFQQ VKVRPVETYP QMLRQSLAAV CPPGGNADNP TIAVLTPGIH NSAYYEHSFL
ADQMGVHLVE GSDLQVIDGR VAMRTTEGFQ PIDVLYRRVD DAFLDPLTFR PDSVLGVAGI
MDVYRAGNIT IANAPGTGIA DDKAIYSYMP EIVEFYTGRK ALLENVPTWR CGEADSLKYV
LAHLDELVVK EVHGSGGYGM LVGPCASKAE LEAFSAKLRA RPANYIAQPT LALSTTPILT
DAGLAPRHVD LRPFVLVSDR IRITPGGLTR VALQEGSLVV NSSQGGGTKD TWVLAD