Gene Bcen2424_4102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4102 
Symbol 
ID4452089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp999443 
End bp1000714 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content64% 
IMG OID639696160 
ProductN-glycosyltransferase 
Protein accessionYP_837731 
Protein GI116692198 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0468214 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.708037 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCC ATAGCCTCAT CCAGCGCCTG CAGGATTTCG TCTTCTACTA TCCGTTCTTC 
ATGTCGTACC TGTGGATGAT CGGCGGCGTC GTGCACTACT TCCTGCTCGA GGAAGGCCGC
GAGCTGTCGA CGCGCACGAT CGCGTCGAGC GGCATCCCGA AGGTGTCGAT CGTCGTGCCC
TGCTTCAACG AAGCCGCGAA CGCGCGCAGC GTGATCGGCC ACCTGAACGG GATGCAGTAT
CCGAACTACG ACATCATCGC GGTCAACGAC GGCAGCAAGG ATCGCACCGG CGAGATCCTC
AACGAGCTGG CCGTCGAGAT CCCGCGGCTG CTCGTGATCC ATCACGCGCG CAACGAAGGC
AAGGCGGTCG GGCTGACGAC CGCGGCGGCC GTGTCGAACG CGGAATACCT GCTGTGCATC
GACGGCGACG CGCTGCTCGC GCACGATGCG ATCGGCTGGA TGCTCGAGCA CTTCCTGACC
GACCCGGGCG TCGGCGCGGT GACCGGCAAC CCGCGCATCC GCACGCGCAC GTCGCTGCTC
GGCCGCATGC AGGTCGGCGA ATTCTCGTCG ATCGTCGGGC TGATCAAGCG CACGCAACAG
GTGTACGGCC GCATCTTCAC GGTGTCGGGC GTGATCACGA TGTTCCGCAA GACGGCGCTC
GCCGACGTCG GCTACTGGAG CTCGGACATG CTCACCGAGG ACATCGACAT CAGCTGGAAG
CTGCAATGCC GCGACTGGCG CGTCGTGTAC GAGCCGCACG CGCTCAGCTG GATCCTGATG
CCGGAGACGG TGAAGGGGCT CTACCGGCAG CGGCTGCGCT GGTCGAAGGG CGGCATCCAG
GTGCTGCTCA AGTACGCGGG CACGCTGATG CGGCCGACGC AGATGATGAT GTGGCCGCTG
TTCGCCGAAT ACCTGATCGG CATCGCGTGG GCGTACTCGA TGACGTTCAT CCTGCTGCTC
GCGTTGATCG ACGTCGTCTA TCCGCTTCCG CCGAACTGGC ATGTGTCCGT GGTGCCGCAC
TGGCACGGGA TGCTGCTGGT CGCGACCTGC ATCCTGCAGC TGATCATCGG CAGCATGATC
GATCGTCGTT ACGACGAAAA ACTCCTGATG TACTTCCTTG ACACCATCTG GTACCCCGTC
GCGTTCTGGC TGATCAGCAT GATCACCACC GTCATCGCCC TGCCCGCCGT CGTGCTGCGG
GGCCGTGGCA AGCGCGCCGT TTGGGTCAGT CCCGACCGAG GCATTCAACA TGAAGAACGC
GCCGATTATT GA
 
Protein sequence
MTSHSLIQRL QDFVFYYPFF MSYLWMIGGV VHYFLLEEGR ELSTRTIASS GIPKVSIVVP 
CFNEAANARS VIGHLNGMQY PNYDIIAVND GSKDRTGEIL NELAVEIPRL LVIHHARNEG
KAVGLTTAAA VSNAEYLLCI DGDALLAHDA IGWMLEHFLT DPGVGAVTGN PRIRTRTSLL
GRMQVGEFSS IVGLIKRTQQ VYGRIFTVSG VITMFRKTAL ADVGYWSSDM LTEDIDISWK
LQCRDWRVVY EPHALSWILM PETVKGLYRQ RLRWSKGGIQ VLLKYAGTLM RPTQMMMWPL
FAEYLIGIAW AYSMTFILLL ALIDVVYPLP PNWHVSVVPH WHGMLLVATC ILQLIIGSMI
DRRYDEKLLM YFLDTIWYPV AFWLISMITT VIALPAVVLR GRGKRAVWVS PDRGIQHEER
ADY