Gene Bcen2424_4034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4034 
Symbol 
ID4453131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp924945 
End bp926252 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content67% 
IMG OID639696092 
Productmajor facilitator transporter 
Protein accessionYP_837663 
Protein GI116692130 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.183201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACCG CACACCCGAG CGCCGCCGTT TCCCCCGACG ACGCGCCCCA CGGCCCTCTC 
TATCGCAAGG TCACGCTGCG CCTCATCACC CTCTTCTGCC TGTGTTACTT CGCGGCCTAT
CTCGACCGCA TCAACATCGG TCTCGCGAAG CTCCAGATGC TCGATGCGCT GAAGTTCAGC
GACACGGTGT ACGGCCTCGG CGCCGGGCTG TTCTTCGCCG GCTACATCCT GTTCGAAGTC
CCAAGCAATC TGGTGCTGCA ACGCGTCGGC GCGAAGCTGT GGATCGCGCG GATCATGATC
ACGTGGGGCC TGCTGTCGGG CGCGACGATG TTCGTGCACA CGCCGGTGCA GTTCTACGTC
GTGCGCTTCC TGCTCGGCGC CGCCGAAGCC GGTTTCCTGC CGGGCGTGCT GCTGTACCTG
ACGCAGTGGT ATCCCGATGC ACGTCGCGCA CGGATCGTCG CGCTGTTCAT GGTGGGCCTG
CCGCTGTCGA GCATGATCGG CAGCCCGATT TCCGGCTGGA TCATGCGTGC GTTCGAAGGC
GCGCACGGGC TCGGCGGCTG GCAGTGGCTG TTCCTGCTCG AAGCGCTGCC GTCGGTGCTG
CTCGGCTTCG CGGTGCTGCG CTGGCTGCCG AACGGCATCG AATCCACGCG CTGGCTGAAC
GCCGACGAGA AGCGGGTGCT GCGCGCGAAT CTCGACGCCG ATCCGTCCGG CAACAAGAGC
CACGCGCTCG GCAAGGCGTT CTCCGATCCG AAGGTGTGGG CGCTCGGCCT GATCGACCTG
TGCGTGCTGC TCGGCCTGTA TGCGGTGAGC TTCTGGCTGC CGACGATCCT GCGCGACACC
GGCGTGAAGG ACGCATATCA CATCGGCTGG CTGATGGTGA TTCCGAACGC CGCCGCCGTG
CTCGCGACGC TGTACTGCGG CGCCAGCTCC GATCGCGCAC GCGAACGCCG CTGGCATATC
GTCGTGCCGT TCATGGTGTC GGCCGTCGCG CTGGCGATCG CGGCTTCGTC GTCGCACGGC
ACGCTCGGCA CGGTGCTGCT GTTCTCGCTG ATCAACGCCG GCGCGGCCGC CGCGATGCCG
GTCGTGTGGG CGCTGCCATC GACGTTCCTG AAGGGCTCGG CCGCCGCCGG CGGCATCGCG
TTCGCATGCT CGATCGCGAA CCTCGGCGGG TTCGGCAGCA CCTATTTCAT CGGCTGGCTG
CGCGATACGT TCCATTCGCA AAGCGCGGGT CTGTATGGTT TCGCCGCGTG CATGCTGGTC
GGCTGCGCAC TCGCGCTCGC GTATCCGGCC CGGCTCGTGA ACCGCTGA
 
Protein sequence
MSTAHPSAAV SPDDAPHGPL YRKVTLRLIT LFCLCYFAAY LDRINIGLAK LQMLDALKFS 
DTVYGLGAGL FFAGYILFEV PSNLVLQRVG AKLWIARIMI TWGLLSGATM FVHTPVQFYV
VRFLLGAAEA GFLPGVLLYL TQWYPDARRA RIVALFMVGL PLSSMIGSPI SGWIMRAFEG
AHGLGGWQWL FLLEALPSVL LGFAVLRWLP NGIESTRWLN ADEKRVLRAN LDADPSGNKS
HALGKAFSDP KVWALGLIDL CVLLGLYAVS FWLPTILRDT GVKDAYHIGW LMVIPNAAAV
LATLYCGASS DRARERRWHI VVPFMVSAVA LAIAASSSHG TLGTVLLFSL INAGAAAAMP
VVWALPSTFL KGSAAAGGIA FACSIANLGG FGSTYFIGWL RDTFHSQSAG LYGFAACMLV
GCALALAYPA RLVNR