Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4028 |
Symbol | |
ID | 4453125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 919016 |
End bp | 920200 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639696086 |
Product | LysR family transcriptional regulator |
Protein accession | YP_837657 |
Protein GI | 116692124 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00259688 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGGCCC CGCTAGATCC GACCGCCCTG CCCCGCGGCA CGTTCGATGC CGCGGGCGCG CTCGACGTGC TCGATGCACG GCTGATGCGC ATCCTGCTCG TGCTGCTGAC CGAGCGCACC GTGTCGCGTG CGGCCGTGCG CCTGAACATG TCGCAGCCGG CGACGAGCGC CGCGCTCAAG CGCCTGCGCA CGCTGCTCGG CGATCCGCTG CTCGTACGCA GCCGCTACGG GATGGTGCCG ACCGAGTTCG GCGCGCGGTT GATCGAGCCG CTGCGCAACG CGCTGCGCGT GATCGACTTC ATCCGCATCC AGCAGCCGAC GTTCGACGCG CGCACGTCGG TGCGCACCTA CCGGATCGGC TGCCCCGACT ACCTGAATGT CCTGTTCGTG CCGAAGCTCG TCGCGCTGTT TCGCGAGCGT GCGCCGCACG CGCAACTGGT GTTCCATCCG CTCGGCGACG GGTTCGACGA CGAGCGCGCG CTGGCCGACG GCGAGCTCGA CGTCGTGATC GACAACCGGC CCGTGCGCCG GTCGCGCTTC CGCCAGGACG ACCTGTTCGA CGACCGCGTC GTATGCCTGA TGCGCGCGAC GCACCCGCTC GCGCGGCGCG ACGCGATGAC GGCCGCCAGG TTCGCGGCGG CGCCGCAGCT GTGCCCGACG CCGTCGTGGC TCGAAGCGTC CGGCGCGATC GACCGGCAAC TCGAACGCGT GGGTCTGCAA CGGCGCATCG TCGTCACGCT GCCGCACTTC GAGCTCGCCG CGCATGCGCT GGTGCGCACC GACCTGATCC TCACCACCAC GTACCGGCTC GCGCGGCACT ATGCGAAGCT GCTGCCGCTC GCCGCAGTCG CGCTGCCGGT CGAGCCGCCG GACATCGCGT ACCGGATAAC GTGGAACGAA TCGGGATCGT GCGCGGAAGG CGGTCGGTGG CTGCGCGGAC TGATCGCCGA GGCGACGCGC GCATGGCTCG ACGCCGAGGC AAGGTTGCCG GCGGTCGCGG CGGTCGCTGC CGTTGCCGCT TCCGGGGCCG ATGCGGACGC AACGAACACC GCGGTGCTGG GCACCGATCC GCCCGAGCCC ACCCGGCGCA CGCGCCGCAG ACCGGCCACC CATTGCCATG CGTCGCATCC GGCGCGCGTC GCGCAGGCGG CACGCATCCA TCGCGGCGCG ACGAAATCGC ACTGA
|
Protein sequence | MRAPLDPTAL PRGTFDAAGA LDVLDARLMR ILLVLLTERT VSRAAVRLNM SQPATSAALK RLRTLLGDPL LVRSRYGMVP TEFGARLIEP LRNALRVIDF IRIQQPTFDA RTSVRTYRIG CPDYLNVLFV PKLVALFRER APHAQLVFHP LGDGFDDERA LADGELDVVI DNRPVRRSRF RQDDLFDDRV VCLMRATHPL ARRDAMTAAR FAAAPQLCPT PSWLEASGAI DRQLERVGLQ RRIVVTLPHF ELAAHALVRT DLILTTTYRL ARHYAKLLPL AAVALPVEPP DIAYRITWNE SGSCAEGGRW LRGLIAEATR AWLDAEARLP AVAAVAAVAA SGADADATNT AVLGTDPPEP TRRTRRRPAT HCHASHPARV AQAARIHRGA TKSH
|
| |