Gene Bcen2424_4022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4022 
Symbol 
ID4453240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp912978 
End bp914102 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content67% 
IMG OID639696080 
Productnitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein 
Protein accessionYP_837651 
Protein GI116692118 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGAC GGGCTGCGGC CCGGCCTCGT TCTCCAACGT TCCGGATCCA TCGATTCATG 
CTCCCACTGC GCCTGCTGCG ATCGCTGCTG ATCGCGTCCC TTTTTGCGTT GCCGGCCGCC
GCCGCGCACG CCGACAAGCC CGCCACCATC CGCATCGGCG TCGCCCAGCA AGGCGCCGGC
GATCCCCCGA CGTTCGGCGG ATCGAGCGCC GCCACCGTGC AGTTGCAGCA GCTCGTCGAA
AAGGAATTCG CCGCCGACGG CATCAAGGTG GAATGGCTGT TCTTCAAGGG TGCGGGCCCG
GCCGTCAACG AGGCGATCGC CAACAAGGCG CTCGACTTCG CGTACCAGGG CGACCTGCCC
GCCGTGCTCG CGCGCTCGAA CGGGATCAAG ACCCGCCTGC TGCTCGCCGC GAGCGTGCGC
TCGGGCATCA AGATCGCGGT GCCGCCCGAC TCGACGATCC GCTCGATCAA GGACCTGAAG
GACCGCCGCG TGTCGATCTT CCGCGGCACC AACCTGCAGC TCGTCGCCGA CAACGCGCTC
GCGAAGAACG GCCTCGGCGA ACGCGACCTG CGCGTGATCA ACCTCGACGC CGCCAGTTCG
CTCGCCGCAC TCGCATCGAA AGGCATCGAC GCGTCGGTGG GCGATTACGC GCTGTACAAG
CTGCGCGACG CGGGCCTCGC GAAGATCATC TACGAATCGC AGAACGACGG CCCGCAACTG
ACGCGCCAGA CCCACCTGCT CGTGCTCGAC GATTTCGACC GCGCGCACCC GGACATCGTG
CAGCGCGTCG TCACCGCGTT CGTGAAGGGC GCGCAATGGT CGTCCGACGA GGCGAACCGC
GATGCGCTGT TCAAGCTGTG GGCGAAGAGC GGCGTGCCGT ATTCGTCGTG GCAGGCCGAC
TATGCGAACC AGCGCCTGAA GGAGCGCCTG TCCCCGCTGA TCGATCCGTT CGTCGTCGCG
CGCTACAAGG CGGTCGCCCA GGATGCGCTG AACCTCAAGC TGATCCGCCA GCCGGTCGAC
GTCGACGGCT GGTTCGAGCC GAAGTATCTC GACAACGCAT TGCGCACGTT GAAACTCGAA
AACTACTGGC CGCGTCATGA CGCCGCCGGC AAGCCCCTCA CCTGA
 
Protein sequence
MTRRAAARPR SPTFRIHRFM LPLRLLRSLL IASLFALPAA AAHADKPATI RIGVAQQGAG 
DPPTFGGSSA ATVQLQQLVE KEFAADGIKV EWLFFKGAGP AVNEAIANKA LDFAYQGDLP
AVLARSNGIK TRLLLAASVR SGIKIAVPPD STIRSIKDLK DRRVSIFRGT NLQLVADNAL
AKNGLGERDL RVINLDAASS LAALASKGID ASVGDYALYK LRDAGLAKII YESQNDGPQL
TRQTHLLVLD DFDRAHPDIV QRVVTAFVKG AQWSSDEANR DALFKLWAKS GVPYSSWQAD
YANQRLKERL SPLIDPFVVA RYKAVAQDAL NLKLIRQPVD VDGWFEPKYL DNALRTLKLE
NYWPRHDAAG KPLT