Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4011 |
Symbol | potE |
ID | 4453229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 901107 |
End bp | 902492 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639696069 |
Product | putrescine transporter |
Protein accession | YP_837640 |
Protein GI | 116692107 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.253932 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAAACG CAGCGCACCT GGCCGACGCA GCCCCGGCGG CCGCGCAGAA GCACCGGATG AACGTCTGGC AGCTCACCGT TCTCACCGCG GTCAACATGA TGGGCTCCGG CATCATCCTG CTGCCGTCGA AGCTCGCGCA GGTCGGCACG ATCTCGCTGC TATCGTGGAT CGTCACGGCC GGCGGCTCGC TCGCGCTGGC CTATGCGTTC GCGCGCTGCG GGATGCTGAG CCGCAAGCCG GGCGGGATGG GCGGCTACGC GGAGTACGCG TTCGGCAAGG CCGGCAACTA CATGGCGAAC TATACGTACG GGCTGTCGCT CGTGATCGCC AACGTCGCGA TCGGCGTCAC GGCGGTCGGC TACGGCACCG TGCTGTTCGA CGCGACGCTG TCGCCGCTGC AGACGGGCCT GTGGACGATC TTCCTGCTCG TGCTGACGAC GGTCGCGAAT TTCGGCGGCT CGCGCATCAC CGGCCGGATC GGCGCGGTGA CGGTGTGGGG CGTGATCATT CCGGTCGTCG TCGTGTCGCT GATCGGCTGG TTCTGGTTCA GCGGCGCAAC CTGGGGCGCC GCGTGGAATC CGAACCACAT GCCGTTCGGG CCCGCCGTCG GCAGCTCGAT CGCGGTGACG CTGTGGGCGT TCCTCGGGCT CGAATCGGCG TGCGCGAACT CGGACGCCGT CGAGAATCCG GAGCGCAACG TGCCGATCGC CGTGCTCGGC GGCACGATCG CGTCGGCGAT CTTCTACATC GTGTCGACCA ACGTGATCGC GGGGATCGTG CCGAATGCGA TTCTCGCGAA GTCGAACGCG CCGTTCGGCA TCGCGTTCGC GACGATGTTC ACGCCGACCG TCGGCACGAT CGTCACCGCG CTGATGGTGA TCGCGTGCAT CGGCTCGCTG CTCGGCTGGC AGTTCACGGT CGCGCAGGTG TTCAAGAGCT CGGCGGACGT CGGCTACTTC CTGCCGGTGT TCGCCCGCGC GACGCGCACC GGCACGCCGA TCGTCGGCAT GGTGATCCTG CTGGTCGCGC AGGTCGCGCT GGCGCTGATG ACGATCAGCC CCGAGCTGAG CAGCCAGTTC CAGAAGATCG TCGATCTCGC GGTCGTCACG AACCTGGTGC CTTACGTGAT GTCGATGGCC GCGCTGATCA CGATCCAGAA GGTCGCGAAG GTGCCGCCGG GCAAGGCGCT CGTGACGAAC GTGATCGCGA TGGTCGCGAC CGCATACAGC TTCTACGCGC TGTTCAGCTC GGGCGAGCAG GCGCTGATGC TCGGCGGCCT GTGCGTGTTC CTCGGCTGGA CGCTGTTCGG CTTCGTCAGC GCGCGCTTCT ACCAGATGGA AGTCGACGCG CACGTGAAGG AGCCGGGGAA GTCGCTGCAG GCGTGA
|
Protein sequence | MENAAHLADA APAAAQKHRM NVWQLTVLTA VNMMGSGIIL LPSKLAQVGT ISLLSWIVTA GGSLALAYAF ARCGMLSRKP GGMGGYAEYA FGKAGNYMAN YTYGLSLVIA NVAIGVTAVG YGTVLFDATL SPLQTGLWTI FLLVLTTVAN FGGSRITGRI GAVTVWGVII PVVVVSLIGW FWFSGATWGA AWNPNHMPFG PAVGSSIAVT LWAFLGLESA CANSDAVENP ERNVPIAVLG GTIASAIFYI VSTNVIAGIV PNAILAKSNA PFGIAFATMF TPTVGTIVTA LMVIACIGSL LGWQFTVAQV FKSSADVGYF LPVFARATRT GTPIVGMVIL LVAQVALALM TISPELSSQF QKIVDLAVVT NLVPYVMSMA ALITIQKVAK VPPGKALVTN VIAMVATAYS FYALFSSGEQ ALMLGGLCVF LGWTLFGFVS ARFYQMEVDA HVKEPGKSLQ A
|
| |