Gene Bcen2424_3917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3917 
Symbol 
ID4452340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp794186 
End bp795709 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content69% 
IMG OID639695976 
ProductGntR family transcriptional regulator 
Protein accessionYP_837547 
Protein GI116692014 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGATACCG TGATCGTCGC CGACTGGCTG TCCGCCCGTC TGGACCGCAG CTCGTCCGAG 
CCGATGTACC GGCAACTGCT GCAGCTGATG CAGCAGGCGA TTCTGACGGG GGAATTGGGG
CCAGGAACAA AGCTCCCGAG TTCGCGCACG CTCGCGGGCG ACCTGTCGAT CGCGCGCAAT
ACCGTGCTGC ACGTGTACGA CCAGCTGACC GCCGAAGGCT ACGTGCTGAC GACCACTGGC
AGCGGCACCT ACGTGGCCGA CACGCGACCG GACGCCGCCG CGATCCGCGT ACCGGGCGCC
CCGCCGCCGC CGGCGGCGGC CGACGAACCG CCGCTGCCCG ACGCGCAGGG CAGCCTGTCG
ATGCGCGGCC GGCAACTGGT CGAGCATGCG GGCGTCTCGC GGCGCCAGTG GGGGGCGTTC
ATGCCAGGCG TGCCGGACGT GTCGGAATTC CCGAGCCGCA CGTGGAGCCG CCTGCAGGCA
CGGCTGTGGA AGGAGGCCAA TCCGGAGCTG CTGACCTATG CGCCGGGCGG CGGCTACCGG
CCGCTGCGGC GCGCACTCGC CGATTACCTG CGCGTCGCGC GCTCGGTCAA ATGCTCGCCT
GACCAGGTGA TCATCACGAC CGGTATCCAT CAGTCGATCG ATCTCGCGGT GCGGCTGCTG
TCCGACATCG GCGATCGCGC GTGGGTCGAG GAGCCGTGCT ACTGGGGCGT GCGCAGCGTG
CTGCAGGCAG CCGGCCTCAC GCTGGCGCCG GTGCCGGTCG ACCAGGAAGG GCTCGATCCG
CGCGCGAGCG ACATGCAGCA TCCGCCGCGG CTCGTGCTCG TCACGCCGTC GCACCAGTAC
CCGCTCGGGA TGGTGATGAG CCTCGCGCGG CGCCGCATGC TGCTCGAATA TGCGCGCCAG
CACCGCTGCT GGATCATCGA GGACGACTAC GACAGCGAAT TCCGCTACGG CAGCCGCCCG
CTCGCGTCGC TGCAGGGGCT CGACGACGGC GGCCGCGTGA TCTACGTCGG CAGTCTCGGC
AAGATGCTGT TCCCCGGGTT GCGGATGGGC TACATGGTCG TGCCCGAGCA TCTGGTCGAC
ACGTTCCGCA CCGGGCTGTC GGAGCTGTAT CGGGAAGGCC AGCTGATGCA GCAGGCCGTG
CTCGCCGAAT TCATCATGGA CGGCCACCTC ACTTCGCACG TCAGACGAAT GCGCACGCTG
TACGGCGAGC GCCGGCAACT GATGATCGAC GCGATCCGCG CGCGCTTCGG CGACGCGCTG
CCGGTGATGG GCGACGAGGC CGGCCTGCAT CTGGTGCTCG GCCTGCCTGA CGCGTGCGAC
GATCGCGCAG TCACACAGAG CGCATTCGAC GCGGGCGTGA TCGTGCGCCC GCTCACCAGC
TACTACAGCA ACCTCGACAC CGCGCGGCAG GGCCTGCTGC TCGGCTATGC CTGCGTCGCG
CACGAAGGCA TCCGGCCCGC GTTCGACACG CTCGCCAACA CCATCGAGCA ACATCTGCCG
CGAAACATCA CGCGCGCGGC GTGA
 
Protein sequence
MDTVIVADWL SARLDRSSSE PMYRQLLQLM QQAILTGELG PGTKLPSSRT LAGDLSIARN 
TVLHVYDQLT AEGYVLTTTG SGTYVADTRP DAAAIRVPGA PPPPAAADEP PLPDAQGSLS
MRGRQLVEHA GVSRRQWGAF MPGVPDVSEF PSRTWSRLQA RLWKEANPEL LTYAPGGGYR
PLRRALADYL RVARSVKCSP DQVIITTGIH QSIDLAVRLL SDIGDRAWVE EPCYWGVRSV
LQAAGLTLAP VPVDQEGLDP RASDMQHPPR LVLVTPSHQY PLGMVMSLAR RRMLLEYARQ
HRCWIIEDDY DSEFRYGSRP LASLQGLDDG GRVIYVGSLG KMLFPGLRMG YMVVPEHLVD
TFRTGLSELY REGQLMQQAV LAEFIMDGHL TSHVRRMRTL YGERRQLMID AIRARFGDAL
PVMGDEAGLH LVLGLPDACD DRAVTQSAFD AGVIVRPLTS YYSNLDTARQ GLLLGYACVA
HEGIRPAFDT LANTIEQHLP RNITRAA