Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_3917 |
Symbol | |
ID | 4452340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 794186 |
End bp | 795709 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639695976 |
Product | GntR family transcriptional regulator |
Protein accession | YP_837547 |
Protein GI | 116692014 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGATACCG TGATCGTCGC CGACTGGCTG TCCGCCCGTC TGGACCGCAG CTCGTCCGAG CCGATGTACC GGCAACTGCT GCAGCTGATG CAGCAGGCGA TTCTGACGGG GGAATTGGGG CCAGGAACAA AGCTCCCGAG TTCGCGCACG CTCGCGGGCG ACCTGTCGAT CGCGCGCAAT ACCGTGCTGC ACGTGTACGA CCAGCTGACC GCCGAAGGCT ACGTGCTGAC GACCACTGGC AGCGGCACCT ACGTGGCCGA CACGCGACCG GACGCCGCCG CGATCCGCGT ACCGGGCGCC CCGCCGCCGC CGGCGGCGGC CGACGAACCG CCGCTGCCCG ACGCGCAGGG CAGCCTGTCG ATGCGCGGCC GGCAACTGGT CGAGCATGCG GGCGTCTCGC GGCGCCAGTG GGGGGCGTTC ATGCCAGGCG TGCCGGACGT GTCGGAATTC CCGAGCCGCA CGTGGAGCCG CCTGCAGGCA CGGCTGTGGA AGGAGGCCAA TCCGGAGCTG CTGACCTATG CGCCGGGCGG CGGCTACCGG CCGCTGCGGC GCGCACTCGC CGATTACCTG CGCGTCGCGC GCTCGGTCAA ATGCTCGCCT GACCAGGTGA TCATCACGAC CGGTATCCAT CAGTCGATCG ATCTCGCGGT GCGGCTGCTG TCCGACATCG GCGATCGCGC GTGGGTCGAG GAGCCGTGCT ACTGGGGCGT GCGCAGCGTG CTGCAGGCAG CCGGCCTCAC GCTGGCGCCG GTGCCGGTCG ACCAGGAAGG GCTCGATCCG CGCGCGAGCG ACATGCAGCA TCCGCCGCGG CTCGTGCTCG TCACGCCGTC GCACCAGTAC CCGCTCGGGA TGGTGATGAG CCTCGCGCGG CGCCGCATGC TGCTCGAATA TGCGCGCCAG CACCGCTGCT GGATCATCGA GGACGACTAC GACAGCGAAT TCCGCTACGG CAGCCGCCCG CTCGCGTCGC TGCAGGGGCT CGACGACGGC GGCCGCGTGA TCTACGTCGG CAGTCTCGGC AAGATGCTGT TCCCCGGGTT GCGGATGGGC TACATGGTCG TGCCCGAGCA TCTGGTCGAC ACGTTCCGCA CCGGGCTGTC GGAGCTGTAT CGGGAAGGCC AGCTGATGCA GCAGGCCGTG CTCGCCGAAT TCATCATGGA CGGCCACCTC ACTTCGCACG TCAGACGAAT GCGCACGCTG TACGGCGAGC GCCGGCAACT GATGATCGAC GCGATCCGCG CGCGCTTCGG CGACGCGCTG CCGGTGATGG GCGACGAGGC CGGCCTGCAT CTGGTGCTCG GCCTGCCTGA CGCGTGCGAC GATCGCGCAG TCACACAGAG CGCATTCGAC GCGGGCGTGA TCGTGCGCCC GCTCACCAGC TACTACAGCA ACCTCGACAC CGCGCGGCAG GGCCTGCTGC TCGGCTATGC CTGCGTCGCG CACGAAGGCA TCCGGCCCGC GTTCGACACG CTCGCCAACA CCATCGAGCA ACATCTGCCG CGAAACATCA CGCGCGCGGC GTGA
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Protein sequence | MDTVIVADWL SARLDRSSSE PMYRQLLQLM QQAILTGELG PGTKLPSSRT LAGDLSIARN TVLHVYDQLT AEGYVLTTTG SGTYVADTRP DAAAIRVPGA PPPPAAADEP PLPDAQGSLS MRGRQLVEHA GVSRRQWGAF MPGVPDVSEF PSRTWSRLQA RLWKEANPEL LTYAPGGGYR PLRRALADYL RVARSVKCSP DQVIITTGIH QSIDLAVRLL SDIGDRAWVE EPCYWGVRSV LQAAGLTLAP VPVDQEGLDP RASDMQHPPR LVLVTPSHQY PLGMVMSLAR RRMLLEYARQ HRCWIIEDDY DSEFRYGSRP LASLQGLDDG GRVIYVGSLG KMLFPGLRMG YMVVPEHLVD TFRTGLSELY REGQLMQQAV LAEFIMDGHL TSHVRRMRTL YGERRQLMID AIRARFGDAL PVMGDEAGLH LVLGLPDACD DRAVTQSAFD AGVIVRPLTS YYSNLDTARQ GLLLGYACVA HEGIRPAFDT LANTIEQHLP RNITRAA
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