Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_3608 |
Symbol | |
ID | 4451704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 454209 |
End bp | 455459 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639695667 |
Product | major facilitator transporter |
Protein accession | YP_837240 |
Protein GI | 116691707 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGCAG TGCCGCAACC GGAGCGTGCC GGCCGCTCGC GGCCGGACGC CGGCGCAACC GATCCCGGCC GCATGGCCGC GTGGCGGCTC GCGATCTGCC TGTCGCTGGG CAGCGCGATC GCGCTTGGCC TCGCCCGCTT TTCGTATGCG CTGCTGCTGC CGCCGATGAA GGCCGACCTC GGCTGGACGT TCGCGCAGGC CGGCGCGCTG AACACGGCGA ACGCGGCCGG TTACCTGATC GGTGCGCTGG CCTTTCCGTT GCTGTCGCGG CGCTGGCGCG CGGGCACGCT GCTCGCGGCC GGCTGTGTGC TGACCGCCGT GCTGATGGCC GCGGGCGGGC TCACGTCGGA CATGCACGTG CTGCTCGCGC AGCGGCTCGC AACGGGTGTC GGCAGCGCGC TGATCTTCAT CAGTGGCGGC GTGCTGGCCG CGCGGCTCGC GTCCGCGTCG CCGCGCGACG CAGGGCTGCT GCTCGGCCTC TATTACGGCG GCACCGGATG GGGCATCGTC GCGTCGTCGC TGCTCGTGCC GGCGACGCTC GTGCACCGTG TACACGGCTG GCAGCCGGCA TGGTTCGCAC TCGCGACGGC GTGCGTGCTG TTCTCGGCGG TGGCCGTGTC GGCTGCGCGC CGCATCGAGC ATGCGCATGC GGCACCGGCC AGGGAGGCCG ACGGCGCGAA ACCGGCCGCG ACCGCGAGCC CGGCCCGCTT CGCACTCGCG CTGGCCGGCT ACGGCCTGTT CGGCGTCGGC TATATCGGCT ACATGACGTT CATCGTCGCG CTGCTGCGCG GCGCGGGGAT GAGCGGCACG GTGGTCGCCG CGTTCTACGT GATGCTCGGC GTCGCGACCG TCGTGTCGGC GCGGTTGTGG TCGGGGCTGC TCGATCGGAT GCGCGGCGGC CAGGCGCTCG CCGTGCTCAA CGCGCTGCTC GGCGTCGCGA CGCTGATGCC CGCGCTGTTC GTGCATCCGG CTGCCGCGTT CGCATCGGGC TTGCTGTTCG GCGCGACGTT CCTGTCGGCG GTGGCCTCCA CGACCGCCTT CGTGCGGCAC AACCTGCCGC CCGATGGTTG GGCGAAGGGC ATCAGCGCAT TCACGACGGT CTTCGCCTTC GGGCAGATCG CGGGGCCGGT CGCGATCGGC TGGGTGTCGG ACAGCGCGGG GCTCGCGCGC GGGCTCGTGT ATTCGGCGCT GACGCTGTTC GCGGGCGCGG CACTTGCGGT CGGGCAGCGT GCGCTGCGGG CGCCTGCGTA G
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Protein sequence | MRAVPQPERA GRSRPDAGAT DPGRMAAWRL AICLSLGSAI ALGLARFSYA LLLPPMKADL GWTFAQAGAL NTANAAGYLI GALAFPLLSR RWRAGTLLAA GCVLTAVLMA AGGLTSDMHV LLAQRLATGV GSALIFISGG VLAARLASAS PRDAGLLLGL YYGGTGWGIV ASSLLVPATL VHRVHGWQPA WFALATACVL FSAVAVSAAR RIEHAHAAPA READGAKPAA TASPARFALA LAGYGLFGVG YIGYMTFIVA LLRGAGMSGT VVAAFYVMLG VATVVSARLW SGLLDRMRGG QALAVLNALL GVATLMPALF VHPAAAFASG LLFGATFLSA VASTTAFVRH NLPPDGWAKG ISAFTTVFAF GQIAGPVAIG WVSDSAGLAR GLVYSALTLF AGAALAVGQR ALRAPA
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