| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3584 |
|---|
| Symbol | |
|---|
| ID | 4451591 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 429354 |
|---|
| End bp | 431165 |
|---|
| Gene Length | 1812 bp |
|---|
| Protein Length | 603 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639695643 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_837216 |
|---|
| Protein GI | 116691683 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCCT GGCTCGACTA CACGCTCAAC GGCCTCATCG TCGGCAACAT CTACGCGCTG
CTCGCAGTCG GGCTCGCGCT GATCTTCGGC GTGTCGCACC TGATCAACTT CGCGCACGGC
TCGGTGTACA TGGTCGGCGC GTTCATCGGC TGGCTGTGCC TGACGCGCTT CGGGCTGCCG
CTGCCCGTCG CGCTCGCGGC GGTCGTGGTC GGCTGCGGCG CGCTCGGCAT CGCAATCGAA
CGGATCGGGC TGCGGCCGCT GCGCCATGCC GCGCGCATCG CGCCGTTGCT CGCGACGATC
GGCATCAGCT TCATCCTCGA CCAGCTCGCG CAGCTCGCGT TCGGCGCGGA CCCGCGCGCG
GTGCCGACGC CGCTACCCGA CTGGCACGTG CGGATCGCCG GCGCGACGCT CGGCTCGCTC
GACTTGCTGA TCGCGGGCAT CGGCATCGCG GCGGCCGCGC TGCTGTACGG CTTCCTGCGC
TTCACGCGCC TCGGCTGGGC CGTGCGCGCG ACCGCGCAGG ATCGCGACGC GGCGCTGCAG
ATGGGTGTCG ACGTCGATCG CGTGAACCAG ACCGTGTTCG CAATTGCGTG CGCGCTCGGC
GGCGTGAGCG GGCTGCTGGT CGGCATGTAC TACAACAGCA TCGATCCGGC GATGGGTTTC
CAGGCGACGC TGAAGGGCGT GGTCGCGCTG CTGATCGGCG GCCTCGGCAA CGTGCCGGGC
GCGATCGCGG GCAGCCTGCT GCTCGGTCTC GTCGAAAGCT ACGGCGTCGC GCTGTTCGGC
ACCAGCTATC GCGACCTGTT CGCGTTCGGG CTGCTGATCG TATTCCTCGT GTGGCGGCCG
AACGGCTTGT TCAGCGCGAA TCGCGCGCTG CCGCCCGAGC CGATGACGGG TACGTTCCTC
GCCGCCGCGA AAGCCGTTCG CGTGCCGCGC CCGCTGCTCG TCGCGCTGAT CGCGGCGGCG
GCCGTGCTGC CCTGGCTCGG TGCATCACCT TACGTGTTGC AGACGCTCAC CAACGCGTGG
CTGTACGGGC TGCTCGCGCT GAGCCTCACG CTCGTCGCGG GCACGGTCGG GCAGATCTCG
CTCGGCCACG CCGCACTGCT CGTGATCGGC GCGTATGCGT CGGCGCTGCT GTCGTCGGAT
CTCGGCTGGT CGCCGGCCGT GACGATTCCG TGCGCGGGCG CGATCACCGC CGTGCTCGGC
ACGCTGCTCG TCTATCCGGC GTTCCGGCTG CGCGGGCACT ACGTGTCGAT CGCGACGCTC
GGCATCGGCG AAGTGGTGAG CCTCGTGATC CTGAACTGGG ACGGCCTGAC GCGCGGCCCG
CTCGGCATCA CCGGCATCGC GCCGCTGCCG TGGGCGACGA CCGCGCGCGC CGCGTACTGG
TTCACGTTCG CGGTGCTCGT CGTGTTCGCG CTCGTGCAGG TGCGGCTGCT GCGTTCGCAT
CTGGGCCGCA CGCTGCGCGC GGTGCGCGAG GACGACGTCG CCGCGCGTGC GCACGGCATC
GCGCCGAACC GCTACAAGGC GATCGCGTTC GCGGTCGGCG GCGTCGCGGC CGGCGTGAGC
GGCGGCATCG CCGCGCATCT GTACAGCTAC ATCAATCACC AGACCTTCGA TTCGCAGGTG
TCGATCCTCG CGCTGACGAT GGTGATCCTC GGCGGGCTCG GCAACGTGCT CGGCGGCATC
GTCGGCGCGA TCGCGCTGAT CGGGCTGCCC GAGTTGTTCC GCTGGGCGGC CGATTACCGG
ATGCTGATCT ACGGCCTCGT GCTGCTGCTG CTCGTCCGGT TCCGGCCGCA GGGCCTGCTC
GGCACGGTGT GA
|
|---|
| Protein sequence | MASWLDYTLN GLIVGNIYAL LAVGLALIFG VSHLINFAHG SVYMVGAFIG WLCLTRFGLP
LPVALAAVVV GCGALGIAIE RIGLRPLRHA ARIAPLLATI GISFILDQLA QLAFGADPRA
VPTPLPDWHV RIAGATLGSL DLLIAGIGIA AAALLYGFLR FTRLGWAVRA TAQDRDAALQ
MGVDVDRVNQ TVFAIACALG GVSGLLVGMY YNSIDPAMGF QATLKGVVAL LIGGLGNVPG
AIAGSLLLGL VESYGVALFG TSYRDLFAFG LLIVFLVWRP NGLFSANRAL PPEPMTGTFL
AAAKAVRVPR PLLVALIAAA AVLPWLGASP YVLQTLTNAW LYGLLALSLT LVAGTVGQIS
LGHAALLVIG AYASALLSSD LGWSPAVTIP CAGAITAVLG TLLVYPAFRL RGHYVSIATL
GIGEVVSLVI LNWDGLTRGP LGITGIAPLP WATTARAAYW FTFAVLVVFA LVQVRLLRSH
LGRTLRAVRE DDVAARAHGI APNRYKAIAF AVGGVAAGVS GGIAAHLYSY INHQTFDSQV
SILALTMVIL GGLGNVLGGI VGAIALIGLP ELFRWAADYR MLIYGLVLLL LVRFRPQGLL
GTV
|
|---|
| |