Gene Bcen2424_3408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3408 
Symbol 
ID4451203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp237735 
End bp238943 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content68% 
IMG OID639695467 
Productmajor facilitator transporter 
Protein accessionYP_837040 
Protein GI116691507 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCG ACTCATCGAC CGGCATTCTT CGGCAGATTC CGCGCAGCGT GTGGGTGCTC 
GGCTGTGTCA GCCTGCTGAT GGACGTGTCG TCCGAAATCA TCCACAGCCT GTTGCCGATG
TTCCTGATGG CGGGGCTCGG TGCGAGCGCG ACGACGATCG GCCTGATCGA GGGGATCGCC
GAGGCGACGT CGCCGGTCGT CAAGGTGTTC TCCGGCACGC TGAGCGACTA TCTGCGCAAT
CGCAAATGGC TCGCGGTGGC CGGCTACGCC CTCGGCGCGC TCAGCAAGCC GCTGTTCGCG
ATCGCGCCGA CGATCGGTGT CGTGGTGACC GCACGGATCG TCGACCGCGT CGGCAAGGGG
ATTCGCGGCG CGCCGCGCGA TGCGCTCGTC GCCGACGTGA CGCCCGTTCA CCTGCGCGGC
GCCGCGTACG GGTTGCGTCA GTCGCTCGAC ACGGTGGGCG CGTTCCTCGG GCCGCTGCTG
GCCGTCGTCA TCATGCTGAT GTGGCGCGAC GATTTCCGCC TCGCGTTCTG GCTGGCCGTG
ATCCCCGGCG TGCTCGCCGT GGCGCTGCTC GCGGTCGGCA TTGATGAGCC CGCACGTGCG
CCGGGCGAGA AGCGCGTCAA TCCGGTTCGC CGCGAGGTCG TCGCGCAACT CGGCGCGCGC
TACTGGTGGG TCGTGGCCGT CGGCGGCGTG TTCGCGCTGG CGCGTTTCAG CGAGGCGTTC
CTCGTGCTGC GCGCGATGAG CAGCGGCGTG CCCGTCGCAC TCGTGCCGCT CGTGATGGTC
GCGATGAACG TCGTATACGC GTTGTCCGCT TACCCGTTCG GTAAGCTCGC CGATACGACG
AGCCACACGA AACTGATGGT GGTCGGGCTC GCGCTGCTGA TCGTCGCCGA TATCGTGCTG
GCGCACGGCG CGCACTGGCC GACCGTGCTC GTCGGTGTCG CGCTGTGGGG CCTCCATATG
GGGATGACGC AAGGGCTGCT CGCGACGATG GTCGCGCAGG CCGCGCCGGC CGAATTGAGA
GGGACGGCGT TCGGCGTGTT CAACCTGATC AGCGGCATCG TCACGCTCGT ATCGAGCGTC
GTCGCGGGTG CCCTGTGGGA CCAGATGGGC GCCGCCGCCA CGTTCTATGC GGGGGCCGTA
TTCAGCGCAG CGACCATCGT GTTGCTCGTG TGCGTTCGCA CGTCGTTCGG CGCGGTGCAG
GATCGCTAG
 
Protein sequence
MQTDSSTGIL RQIPRSVWVL GCVSLLMDVS SEIIHSLLPM FLMAGLGASA TTIGLIEGIA 
EATSPVVKVF SGTLSDYLRN RKWLAVAGYA LGALSKPLFA IAPTIGVVVT ARIVDRVGKG
IRGAPRDALV ADVTPVHLRG AAYGLRQSLD TVGAFLGPLL AVVIMLMWRD DFRLAFWLAV
IPGVLAVALL AVGIDEPARA PGEKRVNPVR REVVAQLGAR YWWVVAVGGV FALARFSEAF
LVLRAMSSGV PVALVPLVMV AMNVVYALSA YPFGKLADTT SHTKLMVVGL ALLIVADIVL
AHGAHWPTVL VGVALWGLHM GMTQGLLATM VAQAAPAELR GTAFGVFNLI SGIVTLVSSV
VAGALWDQMG AAATFYAGAV FSAATIVLLV CVRTSFGAVQ DR