Gene Bcen2424_3356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3356 
Symbol 
ID4452466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp190383 
End bp191117 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content68% 
IMG OID639695417 
ProductAzlC family protein 
Protein accessionYP_836990 
Protein GI116691457 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) 
TIGRFAM ID[TIGR00346] 4-azaleucine resistance probable transporter AzlC 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.840273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGTA GCGTTTCAAC GTCGTCCGGG CTTCGCGACA AGCCCGCCTA TGTCGCCGAG 
ATGGGCCGCG GTTTGCGCGC GGCGCTGCCC GTCATGCTGG GTTTCGTGCC GTTCGCGCTG
GTGCTGGGCG CGCAGGCCGC GCAGAAAGGG CTGAGCCTGT TCGAAGTGCC GATGATGACG
GGCCTGAACT TCGGCGGCGG CTCCGAATTC GCGGCGATCC ATCTGTGGAC GTCGCCGCCG
CACATCGCGC TGATCGTCGC GATGTCGTTT CTCGTGAATT CGCGCCACAT CCTGATGGGC
GCCGCGTTCG AGCCGTATAT CCGCCGCCTG CCGCGCCGCC ACGCGTTCGT CGCGCTGTTC
TTCATGTGCG ACGAGAGCTG GGCGATGTCG CTCGCCGACG CGCGCGAGCG CTCGGCCACG
CACATCAGCG TGCCCTATTA CGCGGGCATC TGCATCGGGC TCTACCTGAC GTGGATCTCG
ATGACGACGC TCGGCGCGGC GGTCGGCCCG ACGATCGGCA ACGTCGAACA GTACGGCTTC
GACATGGCGT TCACGGCCGT GTTTCTGGTG CTGCTGCGCG GGATGTGGAA AGGGGTGCGC
GCGAGCCGTC CGTGGTTCGT GAGCCTCGTC GTCGCGGCGG CTACCCATCT CGCGCTGCCC
GGTGCGTGGT ACGTCGCGGC CGGCGCCTGC GCGGGGCTGA TCTCCGCGCT GCTGTGGGAG
CCGCGCGATG CCTGA
 
Protein sequence
MSSSVSTSSG LRDKPAYVAE MGRGLRAALP VMLGFVPFAL VLGAQAAQKG LSLFEVPMMT 
GLNFGGGSEF AAIHLWTSPP HIALIVAMSF LVNSRHILMG AAFEPYIRRL PRRHAFVALF
FMCDESWAMS LADARERSAT HISVPYYAGI CIGLYLTWIS MTTLGAAVGP TIGNVEQYGF
DMAFTAVFLV LLRGMWKGVR ASRPWFVSLV VAAATHLALP GAWYVAAGAC AGLISALLWE
PRDA