Gene Bcen2424_3346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3346 
Symbol 
ID4452456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp180398 
End bp180865 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content64% 
IMG OID639695407 
Productcupin 2 domain-containing protein 
Protein accessionYP_836980 
Protein GI116691447 
COG category[S] Function unknown 
COG ID[COG3837] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACTC CCTTTCCCCG GGAACTGCTG AAGGCCGCCG ATATCGCGAA GATGGAACCG 
ACGCGCGCGG TGCATTCGCT CAATCCCAAT GCCGTTCGTC TCAAGCGACC GCTCAGCGAC
CTGACCGGGC TGACGCAATT CGGCGTGCAC CTGCTCACGC TGATGCCCGG CCACGAATCG
GCCGAATATC ACCGCCACCT GTACGAAGAG GAATTCGTGT ACGTGCTGTC CGGCACCGGC
GCGGTGACGA TCGGCGAGCA CGCCAGTGAA ATCGGCCCCG GCGATTTCAT CGGCTTTCCG
CGCGGCGGCG ACGCGCATAC GGTGCAGAAC ACTGGCGATG CGCCGCTGGA ACTGCTCGTC
GGCGGCCAGC GGCTCGAGCA CGACGTGTGC GAATACCCGC GCATCGGCAA GCGGCTTTAT
ATCGCGGGCG AGCTCGAGGA GTATGTCGAG CTGCCGAAAC AGCCGTGA
 
Protein sequence
MSTPFPRELL KAADIAKMEP TRAVHSLNPN AVRLKRPLSD LTGLTQFGVH LLTLMPGHES 
AEYHRHLYEE EFVYVLSGTG AVTIGEHASE IGPGDFIGFP RGGDAHTVQN TGDAPLELLV
GGQRLEHDVC EYPRIGKRLY IAGELEEYVE LPKQP