Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_3301 |
Symbol | |
ID | 4453780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 141148 |
End bp | 141987 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639695364 |
Product | integrase catalytic subunit |
Protein accession | YP_836937 |
Protein GI | 116691404 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCCC CGACGGGCCG GCGCGAAGCG CTGGAAGTCC TGACTCGGCG GGGATTATCG CAACGCAAGG CATGTCGTTA CCTGGGGCTG AGCCGCCGGG TGGCGATCTA CACGCTCAAG CAACCGGAGA AAGACCGGAG CTTGGGCGAG CGGTTGATCG CGGCTTCCCA AGAGGTGCCA CGCTTCGGTT ATCGTCGGAT CTCGGCTTGG CTGTCGTTGG GCGAATCGCG TGTGCGCCGG ATGTGGCGTG CGCTGAAGCT GAACATCCCG AAGCGCCGGC CGCGTCGACG GCGTTGCGGC AGCGATATTC GCCTGCCGGG TGCGACGAAA CCCAATTCGG TCTGGAGCTA CGACTTCGTC CACGACCAGT TGGTCGACGG TCGAGTCTTG AAGATGCTGT GCGTGATCGA CGAATACACC CGCGAATGCC TAGCAATCGA GGTCGGGGCC AGCTTGCGTT CGCAAGACGT GATCCTGGTC CTGTCGCGAT TGATGCGCCT ATACGGCAAG CCGGCGTTCA TTCGGTCCGA CAACGGCGCG GAATTTACGG CGGCCAAGGT TATGCGCTGG CTGCGTGACG CGGCAATCGG GCCAGCCTTC ATTACGCCCG GTAACCCGTG GCAAAACGGC TTCGTCGAAA GCTTCAACGG CAAGCTGCGC GACGAGCTGC TGAATCGGGA ATGGTTCCGC AGCCGCGCCG AGGCCAAGGT GCTCATCGAG CGCTGGCGAC AGTTCTACAA CGAGCGTCGG CCGCATAGCG CTCATCGTTA CCAACCTCCT GCCACGGTCC GTCGAGCCTG GCTGGATTCC GAGAATATCG ACAGGCGACT CACTGCTTAA
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Protein sequence | MNSPTGRREA LEVLTRRGLS QRKACRYLGL SRRVAIYTLK QPEKDRSLGE RLIAASQEVP RFGYRRISAW LSLGESRVRR MWRALKLNIP KRRPRRRRCG SDIRLPGATK PNSVWSYDFV HDQLVDGRVL KMLCVIDEYT RECLAIEVGA SLRSQDVILV LSRLMRLYGK PAFIRSDNGA EFTAAKVMRW LRDAAIGPAF ITPGNPWQNG FVESFNGKLR DELLNREWFR SRAEAKVLIE RWRQFYNERR PHSAHRYQPP ATVRRAWLDS ENIDRRLTA
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