| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3246 |
|---|
| Symbol | |
|---|
| ID | 4453657 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 84758 |
|---|
| End bp | 86119 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639695311 |
|---|
| Product | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase |
|---|
| Protein accession | YP_836884 |
|---|
| Protein GI | 116691351 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.581688 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAATGCT TGCTGTTGGA GACGAATGTG CGGGTGACAC GAATAGAAGT GCCGGATATC
GGCGATTACA AGAACATCCC CGTGATCGAA GTTCTGGTGG GAGTCGGACA ACGCGTCGAA
CGGGAGCAGT CGCTCGTCGT GCTCGAGTCG GACAAGGCGA CGATGGATGT GCCCAGTCCC
ACCGCTGGCG TGATCAAGGA GATGAAGGTC GCCGTCGGCG AGACGGTGTC GCAAGGCACG
TTGATCGCGC TGCTCGACAG CGACGGCGAG CGGCAGGACG ACGCGGCGCC TGTGCCTCCG
GCCGCCTCGG CTGCGCGCGA TCTCGCGTGT CCGTCGGCGA ATGTCGCGAC AGGGCTGGTG
CCGGCGCTTG CGCCGGCGCC CGAACTGAAC TCCGCATCCG CGCCATTGCA TCACGCGCCG
GCGCGCGAAG GCGAGCCGTC TCGCGCCAGC CACGCATCGC CGTCGGTGCG CAAGTTCGCG
CGCGAGCTCG GCGTCGACGT CGCGCGCGTG TCGGGCAGCG GCCCGAAGGG CCGCATCACC
AAGGACGACA TCACGGGCTT CGTGAAGGGC GTGATGTCGG GCCAGCGCGC GGCGCCGGGC
GCGGCAGCCG CGCCGGCAGG CGGCGGCGAG CTGAACCTGC TGCCGTGGCC GAAGGTCGAC
TTCGCGAAGT TCGGCCCGTT CGAGCCGAAG CCGCTGTCGC GCATCAAGAA GATCTCGGGC
GCGAACCTGC ATCGCAACTG GGTGATGATC CCGCACGTCA CGAACAACGA CGAAGCGGAC
ATCACCGAGC TCGAAGCGCT GCGCGTGCAG CTGAACAAGG AGCACGAAAA GGCGGGCGTG
AAGTTCACGA TGCTCGCGTT CGTGATCAAG GCGGTGGTGG CCGCGCTGAA GAAATTCCCG
ACCTTCAACG CGAGCCTCGA CGGCGACAAC CTGGTGTTCA AGCAGTACTA CCACATCGGG
TTCGCGGCCG ACACGCCGAA CGGTCTGGTC GTGCCGGTGA TCCGCGATGC GGACAAGAAG
GGCCTCGTCG ACATCGCGAA GGAAATGGCC GAGCTGTCGA AGGCCGCGCG CGACGGCAAG
CTCAAGCCCG ATCAGATGCT GGGTGGCTGC TTCTCGATCT CGTCGCTCGG CGGGATCGGC
GGCACGCACT TCACGCCGAT CATCAACGCG CCGGAAGTGG CGATCCTCGG GTTGTCGCGC
GGGCAGATGA AGCCGGTGTG GGACGGCAAG CAGTTCGTGC CGCGGTTGAC GATGCCGCTT
TCCCTGGCGT TCGATCATCG CGTGATCGAT GGCGCCGAAG CCGCGCGGTT CAATGCTTAT
CTTGGCGCGT TGCTCGCGGA TTTCCGTCGC ATCATTCTTT GA
|
|---|
| Protein sequence | MKCLLLETNV RVTRIEVPDI GDYKNIPVIE VLVGVGQRVE REQSLVVLES DKATMDVPSP
TAGVIKEMKV AVGETVSQGT LIALLDSDGE RQDDAAPVPP AASAARDLAC PSANVATGLV
PALAPAPELN SASAPLHHAP AREGEPSRAS HASPSVRKFA RELGVDVARV SGSGPKGRIT
KDDITGFVKG VMSGQRAAPG AAAAPAGGGE LNLLPWPKVD FAKFGPFEPK PLSRIKKISG
ANLHRNWVMI PHVTNNDEAD ITELEALRVQ LNKEHEKAGV KFTMLAFVIK AVVAALKKFP
TFNASLDGDN LVFKQYYHIG FAADTPNGLV VPVIRDADKK GLVDIAKEMA ELSKAARDGK
LKPDQMLGGC FSISSLGGIG GTHFTPIINA PEVAILGLSR GQMKPVWDGK QFVPRLTMPL
SLAFDHRVID GAEAARFNAY LGALLADFRR IIL
|
|---|
| |