| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3179 |
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| Symbol | |
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| ID | 4453429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | + |
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| Start bp | 15239 |
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| End bp | 16951 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639695245 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_836818 |
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| Protein GI | 116691285 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.1313 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCTTA AGAACCCCGC GACGAAATAC CGACCGTTCA CGCCCGTCAA CCTGCCCGAC
CGCACGTGGC CGTCGCGCAC GATCACGCAG GCGCCGATCT GGATGAGCAC CGACCTGCGC
GACGGCAACC AGGCGCTGTT CGAACCGATG GACGCCACGC GCAAGATGCG GATGTTCAAG
ACGCTGGTGG CGATCGGCTT CAAGCAGATC GAGGTCGCGT TCCCGTCCGC GTCCGAAACC
GATTTCAATT TCGTCCGCGA ACTGATCGAG GGCGGCCACA TTCCCGACGA CGTGACGATC
GAAGTGCTGA CGCAGGCGCG CGACGACCTG ATCGAGCGCA CCTTCGCATC GCTGCGCGGC
GCGAAGCGCG CGATCGTGCA CCTGTACAAC GCGACCGCGC CGGAATTCCG CAAGATCGTG
TTCACCCTCG ATCGCGACGG CGTGAAGCAG CTGGCGGTGA ACGCGGCGCG CACGATCAAG
CGGTGCGCCG ATGCGGCGAC CGACACGCAA TTCACGCTGC AGTACAGCCC GGAAACGTTT
ACCGCGACCG AACTCGATTT CGCGAAGGAA GTGTGCGACG CGGTGTTCGA CGTGTGGCAG
CCGACGCCCG AGCGCAAGTC GATCGTGAAC CTGCCGGCCA CGGTGGAAAT CGGCACGCCG
AATTACTACG CCGACCAGAT CGAGTGGATG CACCGCAACC TCGCGCGCCG CGATTCGCTG
ATCCTGTCGG TGCACCCGCA CAACGACCGC GGTACCGCGG TCGCGGCGGC CGAACTCGCG
GTGATGGCCG GCGCCGACCG GATCGAGGGC TGCCTGTTCG GCAACGGCGA ACGCACCGGT
AACGTCGATC TCGTGACGCT CGCGCTGAAC CTGTACACGC AGGGCGTCGA TCCGGGCCTC
GATTTCTCGC AGATCAACGA AGTCGCGCGC ACGTCCGAGG AGTGCACGCA GTTGCCGGTC
CACCCGCGTC ATCCGTATGT CGGCGACCTC GTGTTCACCG CGTTCTCCGG CTCGCACCAG
GACGCGATCA AGAAGGGCTT CGCGGTACAG CGCGCCGACA CCGTATGGGA AGTGCCGTAC
CTGCCGATCG ATCCGAACGA TCTCGGCCGC ACGTACGATT CGATCATTCG CGTGAACAGC
CAGTCGGGCA AGGGCGGCAT CGCGTACCTG CTCGAACAGG GCTATGGCGT CGCGCTGCCG
CGCCGCATGC AGGTCGATTT CAGCGCGGCC GTGCAGCGCC TGACCGACGA GAGCGGGCAC
GAGGTGACGA GCGCGCAGAT CTGGGCGCTG TTCCAGCAGG AATACGTCGA AAGCGACACG
CCGCTGCGTT ACGTCAGCCA TGAGCTGACC GAGCGCGACG GCCGCGAGAC GATCGTGCTG
ACCGCCGACG TGCACGGCGA GCGCCGCGTG CTGCGTGGGG AAGGCAACGG CCCGCTCGAC
GCGCTGATGC ATGCATTGCA CACGCCGCTG CGGATCCAGC ATTACGAGGA ACGCGCGCTG
TCGCAGGGCG CCGATGCGAA GGCGATCGCG ATCGCCGAGC TGGCCGGTAC GGGCGTGCGC
GGCAGCGCGT TCGGTGTCGG CGTCGATGCG AACCTGACGA CGGCGTCGAT TCGTGCGGTG
ATCAGCGGCG TGAACCGCGC GTATGCCCGT GCGGATGAAG TTGTGCAGGC AACCTTCTTT
GCCGGACAGC CGGCGGTGCA GGCCGTCGCA TAA
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| Protein sequence | MMLKNPATKY RPFTPVNLPD RTWPSRTITQ APIWMSTDLR DGNQALFEPM DATRKMRMFK
TLVAIGFKQI EVAFPSASET DFNFVRELIE GGHIPDDVTI EVLTQARDDL IERTFASLRG
AKRAIVHLYN ATAPEFRKIV FTLDRDGVKQ LAVNAARTIK RCADAATDTQ FTLQYSPETF
TATELDFAKE VCDAVFDVWQ PTPERKSIVN LPATVEIGTP NYYADQIEWM HRNLARRDSL
ILSVHPHNDR GTAVAAAELA VMAGADRIEG CLFGNGERTG NVDLVTLALN LYTQGVDPGL
DFSQINEVAR TSEECTQLPV HPRHPYVGDL VFTAFSGSHQ DAIKKGFAVQ RADTVWEVPY
LPIDPNDLGR TYDSIIRVNS QSGKGGIAYL LEQGYGVALP RRMQVDFSAA VQRLTDESGH
EVTSAQIWAL FQQEYVESDT PLRYVSHELT ERDGRETIVL TADVHGERRV LRGEGNGPLD
ALMHALHTPL RIQHYEERAL SQGADAKAIA IAELAGTGVR GSAFGVGVDA NLTTASIRAV
ISGVNRAYAR ADEVVQATFF AGQPAVQAVA
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