Gene Bcen2424_3107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3107 
SymbolgatB 
ID4448638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp3420370 
End bp3421845 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content65% 
IMG OID639695173 
Productaspartyl/glutamyl-tRNA amidotransferase subunit B 
Protein accessionYP_836748 
Protein GI116691125 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) 
TIGRFAM ID[TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTACTC AGTGGGAAGT CGTTATCGGT CTCGAGACGC ACGCGCAACT GTCGACCGTC 
TCGAAGATTT TCTCGGGCGC ATCGACGCAG TTCGGCGCGG AGCCGAACAC GCAGGCGTGC
CCGGTCGACC TGGCGTTGCC GGGCGTGCTG CCGGTGCTGA ACCGCGGCGC GGTCGAGCGG
GCGATCCGCT TCGGCCTCGC GATCGGCTCG ACCATCGCGC CGCGCAGCAT CTTCGCGCGC
AAGAATTATT TCTACCCCGA TCTGCCGAAG GGCTATCAGA TCAGCCAGTA CGAGATTCCG
GTCGTGCAGG GCGGCCAGAT CACGATCCAG GTGCCGGCCA ACGAGAAGGC CGGCAAGCCG
GCGTACGAGA AGACGGTCAA CCTGACCCGC GCGCACCTCG AGGAAGACGC GGGCAAGTCG
CTGCATGAAG ACTTCGCCGG CATGACCGGC ATCGACCTGA ACCGCGCGGG CACGCCGCTG
CTCGAGATCG TCACCGAGCC GGAAATGCGC AGCGCGGCCG AGGCCGTGGC CTATGCGAAG
GCGCTGCACG CGCTCGTCGT GTGGCTCGGC ATCTGCGACG GCAACATGCA GGAAGGCTCG
TTCCGCTGCG ACGCGAACGT GTCGGTGCGA CCGGTCGGCC AGGAGAAATT CGGCACGCGC
GCGGAAATCA AGAACCTGAA CTCGTTCCGG TTCCTCGAGG AAGCGATCAA CTACGAAGTG
CGTCGCCAGA TCGAGCTGAT CGAGGACGGT GGCGAAGTCG TGCAGGAAAC CCGCCTGTAC
GACCCGGACA AGCGCGAGAC GCGTTCGATG CGCAGCAAGG AAGACGCGCA CGATTACCGC
TACTTCCCCG ATCCCGACCT GATGCCGCTC GTGATCGGCC GGGACTGGGT CGAGCGCGTG
CAGTCCGGCA TGCCGGAGCT GCCGGCCGCG ATGCAGCAGC GCTTCGTCGA CGAGTACGGC
GTGTCCGCGT ACGACGCGGG CGTGCTGACG TCGAGCAAGG CGATGGCCGC GTACTTCGAG
TCGGTGGTCG CGAAGGCCGG CGCAGCGAAT GCGAAGATCG TCGCGAACTG GCTGATGGGC
GACGTGTCGT CGCAACTGAA CCGCGACGGC ATCGAGATCG ACGCGATTCC GGTGTCGGCC
GCGCAGCTCG CGCTGTTGCT GCAGCGCATC GCCGACGGCA CGATCTCGAA CAAGATCGCG
AAGGAAATCT TCGCGACGAT CTGGGACGAG AAGGCGACCG ACGAAGGCGC GGCCGACCGC
ATCATCGACG CGAAGGGCCT CAAGCAGATC TCCGACACCG GCGCGCTGGA AGCGATCATC
GACGAAGTGC TCGCGGCGAA CGCGAAATCG GTCGAGGAAT TCCGCGCCGG CAAGGAAAAG
GCGTTCAACG CGCTGATCGG CCAGGCGATG AAGGCGACCA AGGGCAAGGC CAATCCGCAG
CAGGTCAACG AACTGCTGAA GAAGAAGCTC GGCTGA
 
Protein sequence
MATQWEVVIG LETHAQLSTV SKIFSGASTQ FGAEPNTQAC PVDLALPGVL PVLNRGAVER 
AIRFGLAIGS TIAPRSIFAR KNYFYPDLPK GYQISQYEIP VVQGGQITIQ VPANEKAGKP
AYEKTVNLTR AHLEEDAGKS LHEDFAGMTG IDLNRAGTPL LEIVTEPEMR SAAEAVAYAK
ALHALVVWLG ICDGNMQEGS FRCDANVSVR PVGQEKFGTR AEIKNLNSFR FLEEAINYEV
RRQIELIEDG GEVVQETRLY DPDKRETRSM RSKEDAHDYR YFPDPDLMPL VIGRDWVERV
QSGMPELPAA MQQRFVDEYG VSAYDAGVLT SSKAMAAYFE SVVAKAGAAN AKIVANWLMG
DVSSQLNRDG IEIDAIPVSA AQLALLLQRI ADGTISNKIA KEIFATIWDE KATDEGAADR
IIDAKGLKQI SDTGALEAII DEVLAANAKS VEEFRAGKEK AFNALIGQAM KATKGKANPQ
QVNELLKKKL G