Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_3041 |
Symbol | dppF |
ID | 4448280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 3354546 |
End bp | 3355562 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639695107 |
Product | dipeptide transporter ATP-binding subunit |
Protein accession | YP_836682 |
Protein GI | 116691059 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATGCAG TCAATGAAAC GCCTCGCGCT TCGCACGACG AGGAAGCGGT ACTGGTGGCC GACGGCCTCG CGAAGCACTA TTCGGTGAAG CGCGGGATGT TCGGGCAGGG CACGGTGAAG GCGCTGAACG GCGTGTCGTT CTCGCTGAAG CGCGGCAAGA CGCTCGCCGT CGTCGGCGAG TCGGGCTGCG GGAAATCGAC GCTCGCGCGC CAGCTCACGA TGATCGAGAC GCCCACCGCG GGCAGCCTGA CGATCGACGG CAAGAACGTG GCCGGCGCGA GCCGCGACAC GGTCGCCGAC CTGCGCCGCC GCGTGCAGAT GGTGTTCCAG AATCCGTTCG CGTCGCTCAA CCCGCGCAAG ACCGTCGAGC AGACGCTTTC CGAGCCGCTC GAGATCAACG CGAACCTGAC GGCCGCCGAG CGCGCCGCGC GCATCGCGCA GATCATGCGC ACGGTCGGCC TGCGCCCCGA GCACGCGAAG CGCTATCCGC ACATGTTCTC GGGCGGCCAG CGCCAGCGGG TCGCGATCGC GCGCGCGATG ATTCTCGATC CGCGCATCGT CGTCGCGGAC GAGCCGGTGT CCGCGCTCGA CGTGTCGATC CAGGCGCAGA TCCTGAACCT GTTCATGGAT CTGCAGGAGC AGTTCAAGAC GAGCTACGTG TTCATCTCGC ACAACCTGTC GGTGGTCGAA CACGTTGCCG ACGACGTGAT GGTGATGTAC TTCGGCAGCG TCGCCGAGCT CGGCGACAAG GCGACGATCT ACGCACGGCC GCGCCATCCG TACACGCGGG CGCTGATGTC GGCGACGCCG GCGATCTTCG AGGAAGATCG CCGCGTGCAG ATCAAGCTGC AGGGCGAACT GCCGTCGCCG CTCAATCCGC CGTCGGGCTG CGCGTTCCAC CAGCGCTGCC CGTACGCGGT CGAGCGGTGC CGCGTCGAGG AGCCGCAATT GCGCGAAGTG GACGGCCGGC GTGTAGCCTG CCATCGCGCC GAGGAGGTCG GGGAGGAGAA TGCCTGA
|
Protein sequence | MNAVNETPRA SHDEEAVLVA DGLAKHYSVK RGMFGQGTVK ALNGVSFSLK RGKTLAVVGE SGCGKSTLAR QLTMIETPTA GSLTIDGKNV AGASRDTVAD LRRRVQMVFQ NPFASLNPRK TVEQTLSEPL EINANLTAAE RAARIAQIMR TVGLRPEHAK RYPHMFSGGQ RQRVAIARAM ILDPRIVVAD EPVSALDVSI QAQILNLFMD LQEQFKTSYV FISHNLSVVE HVADDVMVMY FGSVAELGDK ATIYARPRHP YTRALMSATP AIFEEDRRVQ IKLQGELPSP LNPPSGCAFH QRCPYAVERC RVEEPQLREV DGRRVACHRA EEVGEENA
|
| |