Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_2909 |
Symbol | |
ID | 4451023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 3213161 |
End bp | 3214387 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639694975 |
Product | patatin |
Protein accession | YP_836550 |
Protein GI | 116690927 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.255249 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGACTCG CGCTCGTTCT GATGGGAGGC GGCGCGCGCG CCGCATACCA GGTCGGCGTG CTGAAGGCGC TGGCCGAGAT CGCGCGCGAG GCCGATCCGC AGCGGCACAC GCTGCCGTTC GCGGTCGTGT GCGGTTCGTC GGCCGGCGCG ATCAACGCGA CGTCGGTCGC GAGCCACGCG GACGACTTTT CCCATGGCGT GCGGCGCCTG CTCGAATTCT GGGAACCGTT GCGCGCCGAT TACGTGTATC GCACCGACTG GCTCGGCATC GCGGCCGCCG GCGCGCGCTG GCTCGCGACG ATGACGTTCG GCTGGGCGGC GCGCCGCTCC CCGCGGGGGC TGCTCGACAA CACGCCGCTC GCGCACCTGC TGCAGCGCGA GCTGAGTTTT CACCGGATCG AGCAGATGCT CGAGGCGCGC CTGCTGCATG CGCTCGCGAT CACCGCGCTC AGCTATTCGA GCGGTCGGCA CCTCACGTTC TACCAGGCGG CCGAGCCGAT CCAGGCGTGG CGGCGCGCGC AGCGCACCGC GCGGCTCGTC GACCTGTCGG CGTCGCACCT GCTCGCGTCG TCGGCCATTC CGTTCGTGTT CCCCGCCGTG CCGCTCGTGC TCGACGGGCA GATCGAGTAC TTCGGCGACG GCTCGATCCG GCAGATCGCG CCGCTGTCGC CGGCGATCCA CTTCGGTGCG GACCGGATCG TCGTGGTCGG TGCAGCCGAT CCGCGGCCCG AGATTCCGGC CGCGAACGGC GCGGGACGGG CCCGTGGCTA TCCGAGCCTC GCGCAGATCG GCCAGCAGGT GCTCGCGAGC GTGTTCCTCG ACTCGATCGG CTCGGACATC GAACGGATCG AGCACATCAA CCGGATGATC GAGCACCTGC CGCACCAGGT CGAGCTCGAC AGCGGCTGGC GGCACGTCGA CGTGCTCGCG ATCGCGCCGT CCGAGCGCAT CGAGCTGATT GCCGCGAAGC ACCTGAAGCA GATGCCGGCG ACGATGCGCG GGCTGCTCGG CGCGATCGGC GGCAGCCAGC CGGCCGGCGC GTCGTTCGCG AGCTACCTGC TGTTCGAGGA GGCGTTCACG CGCGAGCTGA TCGAGCTCGG CTACCGCGAC GGCCGGGCGC AGCGCGAGAC GCTCGCCGGC TGGATCGCTC AGGCGGACGG CAGCAGCGCA CCGGCGGCCG GCACGCCGCC GGAAGGCGGC CTCGCGGCCG GCGAAATACG GGTCTGA
|
Protein sequence | MRLALVLMGG GARAAYQVGV LKALAEIARE ADPQRHTLPF AVVCGSSAGA INATSVASHA DDFSHGVRRL LEFWEPLRAD YVYRTDWLGI AAAGARWLAT MTFGWAARRS PRGLLDNTPL AHLLQRELSF HRIEQMLEAR LLHALAITAL SYSSGRHLTF YQAAEPIQAW RRAQRTARLV DLSASHLLAS SAIPFVFPAV PLVLDGQIEY FGDGSIRQIA PLSPAIHFGA DRIVVVGAAD PRPEIPAANG AGRARGYPSL AQIGQQVLAS VFLDSIGSDI ERIEHINRMI EHLPHQVELD SGWRHVDVLA IAPSERIELI AAKHLKQMPA TMRGLLGAIG GSQPAGASFA SYLLFEEAFT RELIELGYRD GRAQRETLAG WIAQADGSSA PAAGTPPEGG LAAGEIRV
|
| |