| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2815 |
|---|
| Symbol | |
|---|
| ID | 4449574 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 3110979 |
|---|
| End bp | 3111914 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639694883 |
|---|
| Product | RNA polymerase factor sigma-32 |
|---|
| Protein accession | YP_836458 |
|---|
| Protein GI | 116690835 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
|---|
| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCACG CCCTGACCCT CCCGAACACG CTGAGCCCGA CGCCGGCCAA GGCCGAATCG
GCAGGCTCGC TGGCGCTCGC AGCCCAATCG ATGTTGCCCG GCCAGCTCGG CAACATCGAC
GCGTACATCC AGGCCGTCAA TCGCATTCCG CTGCTGACCG CCGAAGAAGA ACGCCGCTAC
GCAACCGAAT TCCGCGAGGA CAACAACCTC GACGCGGCGC GCCGCCTCGT GCTGTCGCAC
CTGCGTCTCG TCGTGTCGAT CGCGCGCAAC TATCTCGGCT ACGGCCTGCC GCACGGCGAC
CTGATCCAGG AAGGCAACAT CGGCCTGATG AAAGCCGTGA AGCGGTTCGA CCCGGCGCAA
AACGTGCGCC TGGTGTCGTA TGCGATTCAC TGGATCAAGG CCGAGATCCA CGAGTACATC
CTGCGCAACT GGCGCATGGT GAAGGTCGCG ACCACGAAGG CGCAGCGCAA GCTGTTCTTC
AACCTGCGCA GCCACAAGAA GAGCATGCAG GCGATGACGC CCGAGGAAAT CGACGGCCTC
GCGCAGGAGC TCAACGTCAA GCGCGAGGAA GTCACCGAGA TGGAAACGCG CCTGTCGGGC
GGCGACATCG CGCTCGAAGG CCAGGTGGAA GACGGCGAGG AGTCGTACGC GCCGATCGCC
TACCTGGCCG ACTCGCACAA CGAGCCGACC GCCGTGCTGG CCGCACGTCA GCGCGACATG
CTGCAGACGG ACGGCATCGC GCAGGCGCTC GACGCGCTCG ACGCGCGCAG CCGCCGCATC
ATCGAGGCGC GCTGGCTGCA CGTCGACGAC GACGGCTCGG GCGGCTCGAC GCTGCACGAT
CTCGCCGCCG AGTTCGGTGT GTCGGCGGAA CGCATCCGCC AGATCGAAGC GAGCGCGATG
AAGAAGATGC GCACGGCCCT CGCCGAATAC GCGTAA
|
|---|
| Protein sequence | MSHALTLPNT LSPTPAKAES AGSLALAAQS MLPGQLGNID AYIQAVNRIP LLTAEEERRY
ATEFREDNNL DAARRLVLSH LRLVVSIARN YLGYGLPHGD LIQEGNIGLM KAVKRFDPAQ
NVRLVSYAIH WIKAEIHEYI LRNWRMVKVA TTKAQRKLFF NLRSHKKSMQ AMTPEEIDGL
AQELNVKREE VTEMETRLSG GDIALEGQVE DGEESYAPIA YLADSHNEPT AVLAARQRDM
LQTDGIAQAL DALDARSRRI IEARWLHVDD DGSGGSTLHD LAAEFGVSAE RIRQIEASAM
KKMRTALAEY A
|
|---|
| |