Gene Bcen2424_2780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_2780 
Symbol 
ID4448104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp3077345 
End bp3078427 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content65% 
IMG OID639694847 
Productputative transporter 
Protein accessionYP_836423 
Protein GI116690800 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.550591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAAGC AACAAGAGTC GCGCGACACG CAGAACCGCG AGCCGCACCT GCGCAGCGTG 
CGGCTGACGA GCGACTTGAG CCTGCCGAAG CTGTCGGCAC TCGAGATCGG CAGCTATCTC
TTCGCGCTCG TCATGATGTG GCTCGTCCTC GAGCTCAAGC TGCTCGGCGG GATGCTGGCC
GGCCTGCTGG TCTACCAGTT GATCCACACG ATCGCGCCCG TGATCGAACG CCATACCACC
AGCATGCGCG CGCGCTGGGT CGCCGTCGTG CTGCTGTCGA TCGCGATCGT CGGCGCGCTC
ACCGGCCTGA CGCTCGCCAT CATCGAGCAT TTCGAGCACA CGGTGCCGAA CCTGCAGAGC
CTGCTCGGCC AGTTGATGCA GATCGTCGAG CAGACCCGCG CACGCACGCC GGCCTGGATC
GCCAACCTGC TGCCCGTCGA CGTCGAACAG ATGAAGACGA AGGCGGCCGT GCTGATGCAC
TCGCACATGG ACCAGCTCCA GCAAAGCGGC AAGAGCGTCG CGCGCGGCTT CGGCCACGTG
CTGTTCGGGA TGATCATCGG CGCGATGATC GCGATCGGCG TCGAGCAGGG CAAGGTGCGC
CGGCCGCTGT CGACCGCGCT CGTCACGCGC GTGTCGCGCT TCGCCGACGC GTTCCGCCGC
ATCGTGTTCG CGCAGATCAA GATCTCGGCG ATCAACGCGG CATTCACCGG CATCTACCTG
CTCGTCGCGC TGCCGATCTT CCATCAGCGG CTGCCGCTGT CGAAAACGCT CGTGCTGGTC
ACGTTCATCG TCGGCCTGCT GCCGGTGATC GGCAACCTGA TCTCGAACAC GCTGATCGTC
GCTGTGTCGC TGTCGGTCAG CATGGGCACC GCGATCGCGT CGCTCGCGTT CCTCGTCGTC
ATTCACAAGC TCGAATACTT CCTGAACGCG AAGATCATCG GCGGCCAGAT CGAGTCGCGC
GCGTGGGAGC TGCTGCTCGC GATGCTGATC ATGGAAGCCG CGTTCGGGCT GCCGGGCGTG
ATCGCCGCGC CGATCTTCTA TGCGTACCTG AAACGCGAGC TGTACCTGCT GCGGCTGATC
TGA
 
Protein sequence
MEKQQESRDT QNREPHLRSV RLTSDLSLPK LSALEIGSYL FALVMMWLVL ELKLLGGMLA 
GLLVYQLIHT IAPVIERHTT SMRARWVAVV LLSIAIVGAL TGLTLAIIEH FEHTVPNLQS
LLGQLMQIVE QTRARTPAWI ANLLPVDVEQ MKTKAAVLMH SHMDQLQQSG KSVARGFGHV
LFGMIIGAMI AIGVEQGKVR RPLSTALVTR VSRFADAFRR IVFAQIKISA INAAFTGIYL
LVALPIFHQR LPLSKTLVLV TFIVGLLPVI GNLISNTLIV AVSLSVSMGT AIASLAFLVV
IHKLEYFLNA KIIGGQIESR AWELLLAMLI MEAAFGLPGV IAAPIFYAYL KRELYLLRLI