| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2366 |
|---|
| Symbol | |
|---|
| ID | 4450704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 2632749 |
|---|
| End bp | 2635625 |
|---|
| Gene Length | 2877 bp |
|---|
| Protein Length | 958 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639694430 |
|---|
| Product | inner membrane protein |
|---|
| Protein accession | YP_836009 |
|---|
| Protein GI | 116690386 |
|---|
| COG category | [L] Replication, recombination and repair
[S] Function unknown |
|---|
| COG ID | [COG4643] Uncharacterized protein conserved in bacteria
[COG5519] Superfamily II helicase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATCG CACCCATGTC CGAATTCGAG CGGGCGAGAG TCGCGCTCGG CTATGTTCCG
CCCGACGACC GCGACACGTG GAGTCAGGTG GGGATGGCGC TCAAGGCCGA GTTTGGCGAG
GAGGGCTTCG CCCTCTGGAA CGAATGGAGC CAAGGCGCGC AGAACTACAA CGTCAAGGAC
GCGCGCGATG TGTGGAAGTC GTTCAAGGGC GGCAAGATCA CCATCAACAC GCTGTTTCAC
CTCGCCAAGC TCGGCGGCTT CGATCCGCGC GCGTATCGGG CGAAGCCGGT CGATCCAGCG
GAGCGCGAGC GGCAGAAGGC CGAACGCGCG GCCCGCGAAG CGGCCGAGCT GGCGGAGCTG
ACCGAGAAAC AGCAAACCGC ATCGGCGCTC GCCGAATCGC TATGGTCGGC GGCCGAGCCT
GCACCGGCCG ATCACCCGTA TCTCGTTCGC AAGCGCATCC CGGTCGACGC GCTGCGCGTC
TATCGCGGCG GCTTGTGCAT CGGCACGGCC GCATGCGACG GCGCACTCGT CATTCCGGCC
CGTGACGCTG ACGGCAAGCT GTGGACGCTG GAGTTCGTCC TGACGGACGG CCAGAAACGC
TATCTGCCGA ACGGCCGCAA GGCGGGCTGC TTCTCGCTGA TCGGTGGCCC GTTATCTTCC
GCGCCGTCCA CGCTGCTGAT TGGCGAGGGT TACGCCACGT GCGCGACGCT CGCGGCCGCG
ACCGGCTATC CGGCCGCCGT CGCGTTCGAC GCCGGCAACC TGCACGCCGT GGCGACGGCG
CTGCGCGGCC AGTACCCGGA CGCCCGCATC GTCGTGTGCG CCGACGACGA CCACACGACG
AAGGGCAATC CGGGCGTGAC GAAGGCTCGC GCGGCGGCCG AGGCCGTCGC CGGCATCGTC
GCGGTGCCTG ACTTCGGTCC GAACCGCCCG GCCGCCGGCA CCGACTTCAA CGACCTGGCT
GCGCACGTCG GGCCGGATGC GGTGGCCGCC GCCGTGCGCG CTGCGCTCGC CCCGGCCGGC
TCGGCGGACG CCGGCAAGGC CAAGGCTACT CCAGTCGCCG CGAAACCCGC CAAGCGCCCG
AAAACGGCCC GCGCGCAGGA CGGCAAGTCG CGGTTCGTCG TCGACGACAA GGGCGTGTGG
TTTCACGGCT TCAACAATCA GGGCGACCCT CTCCCGCCGC ATTGGGTCAG CACGCGGATC
GACGTGATCG CGGAGACGCG CAACGAGATG AACAGCGAGT GGGGATACCT GCTCGAATTC
ACGGATCGCG ACGGCATCCT GAAACGGTGG GCGGTGCCGG CCGGCCTCTT TGCCGGCGAC
GGCACGGAGC TGCGCCGCAT GCTGCTCGAT ATGGGCGTGA AGCTTGGCGT GACGCAGATC
GCCCGCACGC AGATCGCGAA CTATGTCCAG ATGGCGCAGC CGGACGAGCG CGTGCGCTGC
GTGCCGCGCG TCGGCTGGCA TCACGGCGCG TTCGTGCTGC CCGATCGCGT CATCGGCACC
GGCAAAGAGG CGCTGATCTA TCAGGCCGAT ACGCCGATTC AGAGCCAGTT CAAAGAGCGC
GGCACGCTGG ACGACTGGCA ACGCGAGGTT GCAGCCTACT GCGTCGGCAA TAGCCGGCTG
CTGTTCTGCG TCGCAACCGC CTTCGCTGGT CCGCTGCTGC ACTTCTCCGG GCTTCAGTCG
GGCGGTTTTC ACCTGCTAGG CACAACGTCC AAGGGCAAGT CGACGGGCGG CGTCATCGCA
GCGTCCGTGT TCGGCTCGCC GGACTATGTG CGGAGCTGGA AGGCGACCGA CAACGCGCTC
GAAGCGGTCG CCACGCAGCA CAGCGACGCG CTGCTGATCC TCGACGAAAT CGGGCAGGTC
GAGCCGCGCT TGGTTGGCGA TGTGATCTAC ATGCTCGCGA ACGAGTCGGG CAAGGCTCGC
GCATCGCGTA GCGGCTCGGC AAAGCCGGTT CTCACGTGGC GGCTGCTGTT CCTGTCGAAT
GGCGAAAAGA GCGTGTCCGC GCTGATGGCC GAGGGCAACA AGCCCATGAA AGGCGGTATC
GAAGTGCGCT TGCCCGCGAT CCCGGCCGAG GTCGGCGAAA TGGGCGTCGT GGAGAAGCTG
CACGGCTTCC CGACGCCGGC CGCGCTGATC GAGCATCTAG AGCGGCACGC GGGCATGCAC
TACGGCACGG CCGGCCCCGC GTTCATCGAG TGGGCGTCGT CGCAGGCCGG CGAGCTGGCC
GAGCATCTGC GTGTTCGCGT TGACGAGCTG GTCGGGCAAT GGGTACCGGA CGGTTCGCAT
TCGCAGGTCG CGCGTGTCGC CAAGCGGTTC TGCCTTGTCG CGGTGGCCGG CGAGCTGGCG
ACGGCGCACG GCCTGACCGG TTGGCCGCAA GGCGAAGCGG TCGAGGCCGC GCGTCGCTGC
TTCGAAGGCT GGCTCGAACT GCGCGGCGGC ACCGGCAACT CGGACGAGGC CGAAGCCGTG
CGGCAGGTAC AGCATTTCCT CGCCGCACAC GGCGACAACC GATTCGTTTG GATGAACCGG
GCGCAGGACG ACCACCGGCC GAATGTGCCG CATCGAGCGG GCTTCAAGCA GCATGTGAAG
CGCGACGAGC GGCGCACGCC CATCGCGTCC GATCGGGAGT ATTACGCCGA GTTCGGCGGC
AAGATGAGCG CCGACGATGC CGAAAGCGTC GAGACGGAAT ACCTGATCGA AGCGGCCGTG
TTTCGCAAGG ACGTGTGCGC CGGCTTCGAT CACAAGATCG TCGCCAAGGC ACTGATGAAG
CGCGGCGTGC TGATGCCGCG CAGCGACGGC TATCCGTACC GGCAGGAGTA CATCCCCGGT
CACGGCAAGT TCATGGTCTA TCGCGTGCTG CCGTCGATCT TCACGCTTGA GCTGTGA
|
|---|
| Protein sequence | MSIAPMSEFE RARVALGYVP PDDRDTWSQV GMALKAEFGE EGFALWNEWS QGAQNYNVKD
ARDVWKSFKG GKITINTLFH LAKLGGFDPR AYRAKPVDPA ERERQKAERA AREAAELAEL
TEKQQTASAL AESLWSAAEP APADHPYLVR KRIPVDALRV YRGGLCIGTA ACDGALVIPA
RDADGKLWTL EFVLTDGQKR YLPNGRKAGC FSLIGGPLSS APSTLLIGEG YATCATLAAA
TGYPAAVAFD AGNLHAVATA LRGQYPDARI VVCADDDHTT KGNPGVTKAR AAAEAVAGIV
AVPDFGPNRP AAGTDFNDLA AHVGPDAVAA AVRAALAPAG SADAGKAKAT PVAAKPAKRP
KTARAQDGKS RFVVDDKGVW FHGFNNQGDP LPPHWVSTRI DVIAETRNEM NSEWGYLLEF
TDRDGILKRW AVPAGLFAGD GTELRRMLLD MGVKLGVTQI ARTQIANYVQ MAQPDERVRC
VPRVGWHHGA FVLPDRVIGT GKEALIYQAD TPIQSQFKER GTLDDWQREV AAYCVGNSRL
LFCVATAFAG PLLHFSGLQS GGFHLLGTTS KGKSTGGVIA ASVFGSPDYV RSWKATDNAL
EAVATQHSDA LLILDEIGQV EPRLVGDVIY MLANESGKAR ASRSGSAKPV LTWRLLFLSN
GEKSVSALMA EGNKPMKGGI EVRLPAIPAE VGEMGVVEKL HGFPTPAALI EHLERHAGMH
YGTAGPAFIE WASSQAGELA EHLRVRVDEL VGQWVPDGSH SQVARVAKRF CLVAVAGELA
TAHGLTGWPQ GEAVEAARRC FEGWLELRGG TGNSDEAEAV RQVQHFLAAH GDNRFVWMNR
AQDDHRPNVP HRAGFKQHVK RDERRTPIAS DREYYAEFGG KMSADDAESV ETEYLIEAAV
FRKDVCAGFD HKIVAKALMK RGVLMPRSDG YPYRQEYIPG HGKFMVYRVL PSIFTLEL
|
|---|
| |