Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_2253 |
Symbol | |
ID | 4449299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 2507019 |
End bp | 2509166 |
Gene Length | 2148 bp |
Protein Length | 715 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639694317 |
Product | polynucleotide phosphorylase/polyadenylase |
Protein accession | YP_835897 |
Protein GI | 116690274 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.529509 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCATGT TCAACAAGGT CGTGAAGGAA TTCCAGTGGG GCCAGCACAA GGTGCGCCTC GAAACCGGTG AAGTCGCCCG CCAGGCGAGC GGCGCCGTGA TCGTCGACGT CGAAGACACC GTCGTGCTGG CAACCGTCGT CGGCGCGAAG TCGGCGAAGC CGGGTCAGGA TTTCTTCCCG TTGACCGTCG ACTACCTCGA GAAGACCTAC TCGGCCGGCA AGATCCCGGG CGGCTTCTTC CGCCGCGAAG GCCGTCCGTC GGAGCACGAG ACGCTGACGT CGCGCCTGAT CGACCGTCCG CTGCGCCCGC TGTTCCCGGA AGGCTTCTAC AACGAAGTCC AGGTCGTGAT CCACGTGCTG TCCGTGAACC CGGAAATCCC GGCCGACATC CCCGCGCTGA TCGGCGCATC GGCCGCGCTC GCCGTGTCGG GCCTGCCGTT CAACGGCCCG GTCGGTGCCG CACGCGTGGC ATACATCGAC AACGCATACG TGCTGAACCC GACGCGTGAC CAGCTCAAGG CATCGAGCCT CGACCTCGTC GTCGCGGGTA CGGAGCGCGC CGTGCTGATG GTCGAGTCGG AAGCCGACCA ACTGTCGGAA GAAGTGATGC TGGGCGCCGT GGTGTTCGGC CACGAGCAGA TGCAAATCGC GATCGACGCG ATCCACGAAC TGGTGCGCGA CGGCGGCAAG CCCGAGTGGG ACTGGCAGCC GGCGCCGAAG AACGAGGCGC TGATCGCACG CGTGACCGAG CTGGCGCAGA ACGATCTGCT CGCCGCTTAC CAGCTGCGCG ACAAGCAGGC GCGTTCGGCG AAGCTGAAGG AAGTCTATGC GGCAACCTCG GCGAAGCTCG AGGAAGACGC GCTGGCGGCC GGTACGGTCG CGGCCGACAA GGCCACGGTC GGCAACGTGC TGTTCGACAT CGAAGCGAAG ATCGTCCGTT CGCAGATCCT GAACGGCGAG CCGCGCATCG ACGGCCGTGA CACGCGCACC GTGCGTCCGA TCGAAATCCG CACCGGCGTG CTGCCGCGTA CCCACGGCTC GGCGCTGTTC ACGCGCGGCG AGACGCAGGC GCTGGTCGTC GCGACGCTCG GCACGAAGGG TGACGAGCAG ATCATCGACG CGCTCGAAGG CGAATACCGC GAGCGCTTCA TGCTCCACTA CAACATGCCC CCGTTCGCGA CCGGCGAAAC GGGCCGCGTC GGCTCGCCGA AGCGCCGCGA AATCGGCCAC GGCCGGCTGG CCAAGCGCGC GCTGGTCAAG TGCCTGCCGA GCGCCGACGA ATTCGGCTAC TCGATCCGCG TCGTGTCGGA AATCACCGAG TCGAACGGTT CGTCGTCGAT GGCATCGGTG TGCGGCGGCT GCCTCGCGCT GATGGACGCC GGCGTGCCGA TGAAGGCGCA CGTCGCGGGT ATCGCGATGG GCCTGATCCT CGAAGGCAAC AAGTTCGCGG TGCTGACCGA CATCCTCGGC GACGAAGATC ACCTCGGCGA CATGGACTTC AAGGTGGCCG GCACGGAGCA AGGCGTGACG GCGCTGCAGA TGGACATCAA GATCCAGGGC ATCACGAAGG AAATCATGCA GGTCGCGCTC GCGCAGGCGA AGGAAGGCCG CCTGCACATC CTCGGCAAGA TGACGTCGGC GGTGTCGGGT GCGAACACGC AACTGTCGGA ATTCGCGCCG CGCATGATCA CGGTCAAGAT CAACCCGGAA AAGATCCGCG ACGTGATCGG CAAGGGCGGT TCGGTGATCC GCGCGCTGAC GGAAGAAACG GGCACGACCA TCGACATCTC GGATGACGGC GTCGTGACGA TCGCCAGCAC GAGCAGCGAA GGCATGGCCG AAGCGAAGAA GCGCATCGAG CAAATCACGG CCGAGATCGA AGTCGGTCAG GTGTATGAAG GCACGGTGCT CAAGCTGCTC GATTTCGGCG CGATCGTGAA TCTGCTGCCG GGCAAGGATG GCCTGCTGCA CATCTCGGAA ATCGTCAACG AGCGCGTGAA GGACATCAAC GACTACCTGA AGGAAGGTCA GCAGGTGAAG GTCAAGGTGA TCCAGACGGA CGAGAAGGGT CGCGTGCGTC TGTCGGCCAA GGCGCTGCTG AATGAAGCAG CGGCGGCAGC GCAGTCGGAT ACGCCGCCGC AGCAGTAA
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Protein sequence | MSMFNKVVKE FQWGQHKVRL ETGEVARQAS GAVIVDVEDT VVLATVVGAK SAKPGQDFFP LTVDYLEKTY SAGKIPGGFF RREGRPSEHE TLTSRLIDRP LRPLFPEGFY NEVQVVIHVL SVNPEIPADI PALIGASAAL AVSGLPFNGP VGAARVAYID NAYVLNPTRD QLKASSLDLV VAGTERAVLM VESEADQLSE EVMLGAVVFG HEQMQIAIDA IHELVRDGGK PEWDWQPAPK NEALIARVTE LAQNDLLAAY QLRDKQARSA KLKEVYAATS AKLEEDALAA GTVAADKATV GNVLFDIEAK IVRSQILNGE PRIDGRDTRT VRPIEIRTGV LPRTHGSALF TRGETQALVV ATLGTKGDEQ IIDALEGEYR ERFMLHYNMP PFATGETGRV GSPKRREIGH GRLAKRALVK CLPSADEFGY SIRVVSEITE SNGSSSMASV CGGCLALMDA GVPMKAHVAG IAMGLILEGN KFAVLTDILG DEDHLGDMDF KVAGTEQGVT ALQMDIKIQG ITKEIMQVAL AQAKEGRLHI LGKMTSAVSG ANTQLSEFAP RMITVKINPE KIRDVIGKGG SVIRALTEET GTTIDISDDG VVTIASTSSE GMAEAKKRIE QITAEIEVGQ VYEGTVLKLL DFGAIVNLLP GKDGLLHISE IVNERVKDIN DYLKEGQQVK VKVIQTDEKG RVRLSAKALL NEAAAAAQSD TPPQQ
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