Gene Bcen2424_2224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_2224 
Symbol 
ID4448855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp2480042 
End bp2480539 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content70% 
IMG OID639694287 
Producthypothetical protein 
Protein accessionYP_835868 
Protein GI116690245 
COG category[R] General function prediction only 
COG ID[COG1569] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID[TIGR00305] probable toxin-antitoxin system toxin component, PIN family 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGCT CTCTCGCCCC GCATGCCGCA CACCGCGTCG TGCTCGACTC GAACGTCTGG 
ATCGACATTC TCGTATTCGA CGACCCCGCT ACGCGCCCGA TCCGTGCCGC GCTGGAGCAC
GGCACGCTGG CCGCCGTGAT CGACGGCCGC TGCCTGACCG AACTCGAATA CGTGCTCGAC
TATCCGCAGT TCCAGTCGCG CGCGATCGAC AAAGCGGCCG CGCTCGCAAC GGTCGCCCGG
CTCGCGAGCC TCGTCGAGCC GCCGCCCCTC GACGCCGACG CGCCGCCGCT GCCGAAGTGC
AAGGACCGCG ACGACCAGAA ATTTCTCGAA CTCGCCCGCG CCGCGCAGGC CGATTGGCTC
GTGTCGAAAG ACCGCGCGCT GCTGAAGCTC GCGAAACGCA CCGCACGCGA CTTCGGTTTC
CGGATCGCAC AACCCGCGCC GTTTGCCGAA GCCTGCGCCC TCGACGCCGC GCCGCCCGCC
ACGGCGACGC CGGCCTGA
 
Protein sequence
MTRSLAPHAA HRVVLDSNVW IDILVFDDPA TRPIRAALEH GTLAAVIDGR CLTELEYVLD 
YPQFQSRAID KAAALATVAR LASLVEPPPL DADAPPLPKC KDRDDQKFLE LARAAQADWL
VSKDRALLKL AKRTARDFGF RIAQPAPFAE ACALDAAPPA TATPA