| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2147 |
|---|
| Symbol | |
|---|
| ID | 4450208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 2386974 |
|---|
| End bp | 2388488 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639694203 |
|---|
| Product | nitrogen metabolism transcriptional regulator, NtrC, Fis family |
|---|
| Protein accession | YP_835791 |
|---|
| Protein GI | 116690168 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.447968 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCGA TCTGGATAGT AGACGACGAC CAATCGATCC GCTGGGTGCT TGAAAAGGCA
CTCGCCCGGG ACAGCTTCGC GACGAAGAGC TTCGCGAACG TGCGCGATGC GCTGGCCGCG
CTCGACCACG AGACGCCGCA GGTGCTCGTG TCCGACATCC GGATGCCGGG CGGCTCGGGC
CTCGAGTTGC TGCAGGCGAT GCACGAGCGG CTGCCGGGTC TGCCCGTCAT CATCATGACG
GCGTTCTCCG ATCTCGACAG CGCCGTCGCG GCGTTCCAGG GCGGCGCGTT CGAATACCTC
GCGAAGCCGT TCGACGTCGA CAAGGCGGTC GAGCTGATTC GCCGTGCAGT GGAAGAAAGC
CTGCGCGGCG GCGCGCCGCA GGACGAGCGC GTGGCCGAGG CGCCCGAGAT GCTCGGCCAG
GCGCCCGCGA TGCAGGACAT GTTCCGCGCG ATCGGCCGCT TGTCGCATTC GGCCGCGACC
GTGCTGATCA CCGGCGAGTC GGGCACCGGC AAGGAACTCG TCGCGCGGGC GCTGCACCGT
CACAGCCCGC GTGCGAACGG ACCGTTCATC GCGCTGAACA CGGCGGCGAT TCCGAAGGAT
CTGCTTGAAT CCGAACTGTT CGGCCACGAG CGCGGCGCGT TCACCGGCGC GCAGACGACG
CGCCAGGGCC GCTTCGAGCA GGCCGAGAAC GGCACGCTGT TCCTCGACGA AATCGGCGAC
ATGCCGTTCG ATCTGCAGAC GCGCCTGTTG CGCGTGCTGT CGGACGGGCA GTTCTACCGC
GTCGGCGGGC ACAACCCGCT GCGCGCGAAC GTGCGCGTGA TCGCCGCGAC GCACCAGAAT
CTCGAGTCGC GCGTGCGGCA GGGGCTGTTC CGCGAGGACC TTTACCACCG GCTCAACGTG
ATCCGGCTGC GTCTGCCGCC GCTGCGCGAA CGCAGCGAGG ACATCGCGCT GCTCACGCGC
CACTTCCTGC AGAAGAGCGC GCGCGATCTC GGCGTCGAGC CGAAGCGCGT GTCCGACGAC
GCGCTCGCGT ACCTGACGTC GCTGCCGTTT CCCGGCAACG TGCGGCAGCT CGAGAATCTC
GCGAACTGGC TGACCGTGAT GGCGCCCGCG CAGACGGTCG AGATCAAGGA TCTGCCGCCC
GACCTCGTGC CGGCCGGTGC GCCGGTCGTC GCGACGGGCG ACGGCGCGGA CGCGCACGGC
AGCGGCGGTC ACGCGGCCGC GGTGCCTTCC GCGATCGGTG CAGCGCCGAC GGCCGCGCCC
GTCGCGAGCG CGGCGAACGG CAGCGCGCCG GCCGGCTACC CGTTGTGGGA GCACGGGCTG
CGCACCGAAG TCGCGCGGCT GTTGCGCGAG AACTCGGCCG ACGTGATGGA CGAACTCGCA
CGCCGCTTCG AAGCCGCCGT GATCCGTGAG GCGCTCGACT TCACGCGCGG TCGCAAGGTC
GAGGCCGCGG AGCGGCTCGG GATCGGCCGC AACACGATCA CGCGCAAGAT CCAGGAACTC
CATCTGGAGC CCTGA
|
|---|
| Protein sequence | MKPIWIVDDD QSIRWVLEKA LARDSFATKS FANVRDALAA LDHETPQVLV SDIRMPGGSG
LELLQAMHER LPGLPVIIMT AFSDLDSAVA AFQGGAFEYL AKPFDVDKAV ELIRRAVEES
LRGGAPQDER VAEAPEMLGQ APAMQDMFRA IGRLSHSAAT VLITGESGTG KELVARALHR
HSPRANGPFI ALNTAAIPKD LLESELFGHE RGAFTGAQTT RQGRFEQAEN GTLFLDEIGD
MPFDLQTRLL RVLSDGQFYR VGGHNPLRAN VRVIAATHQN LESRVRQGLF REDLYHRLNV
IRLRLPPLRE RSEDIALLTR HFLQKSARDL GVEPKRVSDD ALAYLTSLPF PGNVRQLENL
ANWLTVMAPA QTVEIKDLPP DLVPAGAPVV ATGDGADAHG SGGHAAAVPS AIGAAPTAAP
VASAANGSAP AGYPLWEHGL RTEVARLLRE NSADVMDELA RRFEAAVIRE ALDFTRGRKV
EAAERLGIGR NTITRKIQEL HLEP
|
|---|
| |