| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2137 |
|---|
| Symbol | aceE |
|---|
| ID | 4449813 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 2370814 |
|---|
| End bp | 2373510 |
|---|
| Gene Length | 2697 bp |
|---|
| Protein Length | 898 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639694192 |
|---|
| Product | pyruvate dehydrogenase subunit E1 |
|---|
| Protein accession | YP_835781 |
|---|
| Protein GI | 116690158 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
|---|
| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.304128 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCTG TACCGAACGA AGTGATGAAA TATGTCGCCG CCGAACGTGA CGACGACCCG
CAAGAAACCG TCGAGTGGCT GGAGTCGCTC GATGGCGTGA TCTCCTCCGT GGGCACCGGC
CGTGCGCATT ACCTGATCGA AAAGCAGATC GAATTCGCCC GCATGCACGG CGAACACCTG
CCGTTCTCCG CCAATACCCC GTACATCAAC ACGATTCCGG TCGAAGCCCA GGCAAAGATT
CCGGGCGACC AGGACATCGA GCACCGCATC CGTTCGTACA CGCGCTGGAA CGCGCTGGCG
ATGGTGCTGC GCGCAGGCAA GGACACGAAC GTCGGCGGCC ACATCGCGTC GTTCGCATCG
GCCGCGACGC TCTACGACGT CGGCTACAAC CACTTCTGGC ACGCAGCATC CGACCAGCAC
GGCGGCGATC TCGTGTTCGT GCAGGGCCAC TCGTCGCCGG GCGTGTACTC GCGCGCGTTC
CTGCTCGGCC GCCTGAAGGA AGAGCAGCTC GACAACTTCC GCCAGGAAGT CGACGGCAAG
GGTATCTCGT CGTACCCGCA CCCGTGGCTG ATGCCGGATT TCTGGCAGTT CCCGACCGTG
TCGATGGGCC TCGGCCCGAT CATGGCGATC TACCAGGCCC GCTTCATGAA GTACCTGGAG
TCGCGCGGCA TCGCGAAGAC GGAAGGCCGC AAGGTGTGGG CGTTCCTCGG CGACGGCGAG
ACGGACGAGC CGGAATCGCT CGGCGCGATC GGCATGGCGA GCCGCGAGAA GCTCGACAAC
CTCGTGTTCG TGATCAACTG CAACCTGCAG CGTCTCGACG GCCCGGTGCG CGGCAACGGC
AAGATCATCC AGGAACTCGA ATCGGAATTC CGCGGCGCCG GCTGGAACGT GATCAAGGTC
ATCTGGGGCA GCCGCTGGGA TGCGCTGTTC GCGCGCGACA AGTCGGGCGC GCTGATGCGC
CGCATGATGG AGTGCGTCGA CGGCGAATAC CAGACGTACA AGTCGGAGTC GGGCGCGTAC
GTTCGCGAGC ACTTCTTCAA CACGCCTGAA CTGAAGGCGC TCGTCGCCGA CTGGTCGGAC
GACGACATCT GGGCGCTGAA CCGCGGCGGT CACGATCCGC ACAAGATCTA CGCGGCATTC
CACGAAGCCA CGAACACGAA GGGCGCGCCG ACCGTCATCC TCGCGAAGAC CATCAAGGGC
TACGGGATGG GCGAGTCGGG CCAGGCGATG AACATCACGC ACCAGCAGAA GAAGCTGCCG
GTCGAGCAAC TGAAGAAGTT CCGTGACCAG TTCCGCCTGC CGATCACCGA CGAGCAGATC
GCCGACGTGC CGTACCTGAA GTTCGAGGAA GGCTCGAAGG AACTCGAATA CATGCGCCAG
AAGCGCATGG ACCTCGGCGG CTACTTGCCG CACCGCCGCG AGAAGGCGAC GTCGCTGCCG
GTGCCGGCGC TCGACGCGTT CGAGCCGCTC CTGAAGGGCA CGGGCGAAGG CCGCGAGATC
TCGACGACGA TGGCGTTCGT GCGGATTCTG AACATCCTGC TGAAGGACAA GGCGCTCGGC
AAGCGCGTCG TGCCGATCGT CCCGGACGAA TCGCGTACGT TCGGCATGGA AGGCCTGTTC
CGCCAGATCG GTATCTGGAA CCAGGAAGGC CAGAAGTACG TGCCGGAAGA TTCTGACCAG
CTGATGTTCT ACAAGGAATC GCAGACCGGC CAGATCCTGC AGGAAGGCAT CAACGAAGCG
GGCGGCATGT GCGACTGGAT CGCGGCGGCG ACGTCGTATT CGACGCACGG CGAGATCATG
GTGCCGTTCT ACATCTTCTA CTCGATGTTC GGCTTCCAGC GGATCGGCGA CCTCGCCTGG
GCCGCGGGCG ACATGCGTTC GCGCGGCTTC CTGCTGGGCG GCACCGCGGG CCGTACGACG
CTGAACGGCG AAGGCCTGCA GCACGAAGAC GGTCACTCGC TCCTGTGGGC GGCATCGGTG
CCGAACTGCG TGAGCTACGA CCCGACGTTC GGCTACGAAC TCGCGGTGAT CATCCAGGAC
GGCCTGCGCC GCATGGTGCA GGACCAGGAA GACGTGTACT ACTACATCAC GGTGATGAAC
GAGAACTACG AGCACCCGGC GATTCCGCAG GGCGAGCACG TGGCGGCTGA CATCATCAAG
GGCATGTACG CGTTCAAGAA GGCCGACGCC GACAAGAAGG CGCCGCGCGT CCAGTTGCTC
GGCGCGGGCA CGATCTTCAA CGAAGTGATC GCCGCCGCCG ACCTGCTGAA GAACGACTGG
GGCGTCGCCG CCGACCTGTG GAGCGTGCCG AGCTTCACCG AACTCGCGCG CGAAGGCCAT
GAGGTCGAGC GCTGGAACCT GCTCCATCCG ACCGAGGAGC GTCGCCTGTC GCACGTGCAG
AAGTGCCTGA AGGACACGCA GGGCCCGGTC ATCGCATCGA CCGACTACGT CCGTGCGCTG
GTCGACCAGA TCCGTGGCCA GATCGATCGC CGCTTCGTCG TGCTGGGCAC CGACGGCTTC
GGTCGTTCGG ACACCCGCGA GAAGCTGCGT CACTTCTTCG AGGTCGACCG TCACTGGGTC
ACCGTCGCCG CGCTCAACGC GCTGGCCGAC GAAGGCACGA TCGAGCGCAA GGTGGTCGCG
GACGCGATCG CCAAGTACAA CCTCGATCCG TCCAAGCCCA ACCCGATGAC CGTTTAA
|
|---|
| Protein sequence | MSAVPNEVMK YVAAERDDDP QETVEWLESL DGVISSVGTG RAHYLIEKQI EFARMHGEHL
PFSANTPYIN TIPVEAQAKI PGDQDIEHRI RSYTRWNALA MVLRAGKDTN VGGHIASFAS
AATLYDVGYN HFWHAASDQH GGDLVFVQGH SSPGVYSRAF LLGRLKEEQL DNFRQEVDGK
GISSYPHPWL MPDFWQFPTV SMGLGPIMAI YQARFMKYLE SRGIAKTEGR KVWAFLGDGE
TDEPESLGAI GMASREKLDN LVFVINCNLQ RLDGPVRGNG KIIQELESEF RGAGWNVIKV
IWGSRWDALF ARDKSGALMR RMMECVDGEY QTYKSESGAY VREHFFNTPE LKALVADWSD
DDIWALNRGG HDPHKIYAAF HEATNTKGAP TVILAKTIKG YGMGESGQAM NITHQQKKLP
VEQLKKFRDQ FRLPITDEQI ADVPYLKFEE GSKELEYMRQ KRMDLGGYLP HRREKATSLP
VPALDAFEPL LKGTGEGREI STTMAFVRIL NILLKDKALG KRVVPIVPDE SRTFGMEGLF
RQIGIWNQEG QKYVPEDSDQ LMFYKESQTG QILQEGINEA GGMCDWIAAA TSYSTHGEIM
VPFYIFYSMF GFQRIGDLAW AAGDMRSRGF LLGGTAGRTT LNGEGLQHED GHSLLWAASV
PNCVSYDPTF GYELAVIIQD GLRRMVQDQE DVYYYITVMN ENYEHPAIPQ GEHVAADIIK
GMYAFKKADA DKKAPRVQLL GAGTIFNEVI AAADLLKNDW GVAADLWSVP SFTELAREGH
EVERWNLLHP TEERRLSHVQ KCLKDTQGPV IASTDYVRAL VDQIRGQIDR RFVVLGTDGF
GRSDTREKLR HFFEVDRHWV TVAALNALAD EGTIERKVVA DAIAKYNLDP SKPNPMTV
|
|---|
| |