| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2047 |
|---|
| Symbol | |
|---|
| ID | 4449127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 2270662 |
|---|
| End bp | 2272212 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639694094 |
|---|
| Product | DEAD/DEAH box helicase domain-containing protein |
|---|
| Protein accession | YP_835691 |
|---|
| Protein GI | 116690068 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTTCGA GCATCAACTC CAGCCCGCTC AACGCGATCG CCGACCAGGC GCTCGGTCTC
GACGACGCCG CCGCACCGGC CGCGGTCGAA CCGGCGTCGG ACGAGCCGAG CTTCGCGTCG
CTCGGGTTGT CGCCGGAGAT CGTCTCCGCG CTGCAGGCCG CCGGCTACGT GAAGCCGACG
CCGGTCCAGC AGCGCGCGAT TCCGGCCGGC ATCGCCGGCC GCGACCTGCT GGTGTCGAGC
CCGACCGGTT CGGGCAAGAC GGCCGCATTC ATGCTGCCCG CGATCGAACG TTTCGCGCAG
CTCCAGAAGA CGCAGGCGCA GCAGCCGCGC GCGCCGCGTG AACCGAACCA GGGCGACCGC
CGCGTGCGCC GCCCGCAACC CGTCGCGCGC CCGGGCCTGC TCGTGCTGAC CCCGACCCGT
GAACTCGCGA TGCAGGTCAC GACGGCCGCA TCGACGTACG GCAAGCACCT GAAGCGCCTG
CGCACGGTCA GCATCCTGGG CGGCGTCGCC TACGGCCAGC AGCTGATGCT GCTCGCGAAG
AACCCGGAAA TCCTGGTTGC CACGCCGGGC CGGCTGCTCG ATCACCTCGA GCGCGGCCGT
ATCGACCTGT CCGAACTGAA GATGCTCGTG CTCGACGAAG CCGACCGCAT GCTCGACATG
GGCTTCATCG AAGACATCGA AACGATCGTC GCCGCCACGC CGGAATCGCG CCAGACGATG
CTGTTCTCGG CCACGCTCGA CGGCAAGATC GGTTCGCTGA CGAGCCGCCT GCTGAAGGAT
CCGGAACGGA TCGAGATCCA GCAGCGCCTC GAATCGCGCG CGAACATCGC GCAGACCGTC
CATTACGTCG ACGACCGCGA TCACAAGGAT CGCCTGCTCG ATCACCTGCT GCGCGACGAC
GCGCTCGACC AGGCGATCAT CTTCACGGCG ACCAAGATCG ACGCCGACCA GCTCGCCGGC
CGTCTCGCCG ACGCAGGCTT CGAATCGGCC GCGCTGCACG GCGATCTGCC GCAGGGCGCG
CGCAACCGCA CGATCCGTGC GCTGCGCGAG CGCCGTGTGC GCGTGCTGGT TGCCACCGAC
GTCGCGGCAC GCGGCATCGA CATCCCGGGC ATCACGCACG TGTTCAACTA CGACCTGCCG
AAGTTCGCGG AAGACTACGT GCACCGTATC GGTCGTACCG GCCGCGCGGG CCGTTCGGGT
ATCGCGGTAA GCCTCGTGCA CCACGCCGAG CAAGGCGCGC TCAAGCGCAT CGAGCGCTTC
GTGCGCTCGC CGCTGCCGGT CAACGTGATC GAAGGTTTCG AGCCGCGCAA GTCGCCCCCG
CGTAACGGCG GCACCGGTGG TCGCGGCCGT CCGGGCGGCG GTAACGGCGG TCGCCGTTTC
GGCGGCAAGC CGGGCGGCGG TCATGGCGGC AACGGCAACG GCAATGGCCG CAGCTACGGC
GGCGGCAATG GCGGCGGCTG GAGCGGCAAG CCGGGCGGCA GCCGTGACGG CGGCCCGCGT
CGCGACGGCC AGCGCAGCGG CGGCCCGCGC CGCAGCAACT CGGCATCGTA A
|
|---|
| Protein sequence | MTSSINSSPL NAIADQALGL DDAAAPAAVE PASDEPSFAS LGLSPEIVSA LQAAGYVKPT
PVQQRAIPAG IAGRDLLVSS PTGSGKTAAF MLPAIERFAQ LQKTQAQQPR APREPNQGDR
RVRRPQPVAR PGLLVLTPTR ELAMQVTTAA STYGKHLKRL RTVSILGGVA YGQQLMLLAK
NPEILVATPG RLLDHLERGR IDLSELKMLV LDEADRMLDM GFIEDIETIV AATPESRQTM
LFSATLDGKI GSLTSRLLKD PERIEIQQRL ESRANIAQTV HYVDDRDHKD RLLDHLLRDD
ALDQAIIFTA TKIDADQLAG RLADAGFESA ALHGDLPQGA RNRTIRALRE RRVRVLVATD
VAARGIDIPG ITHVFNYDLP KFAEDYVHRI GRTGRAGRSG IAVSLVHHAE QGALKRIERF
VRSPLPVNVI EGFEPRKSPP RNGGTGGRGR PGGGNGGRRF GGKPGGGHGG NGNGNGRSYG
GGNGGGWSGK PGGSRDGGPR RDGQRSGGPR RSNSAS
|
|---|
| |