| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1923 |
|---|
| Symbol | clpP |
|---|
| ID | 4450440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 2138393 |
|---|
| End bp | 2139046 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639693969 |
|---|
| Product | ATP-dependent Clp protease proteolytic subunit |
|---|
| Protein accession | YP_835567 |
|---|
| Protein GI | 116689944 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
|---|
| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.349475 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCACTC GCGCTGAATT GCTGGACATG CTTGCTTCGA ACGCGCCGCA GGGTTTCGAG
GCGCAAGCGC TGGGGCTGGT GCCGATCGTC GTCGAAACGA GCGGCCGCGG CGAGCGTTCG
TACGATATCT ATTCGCGTCT CCTGAAGGAG CGCCTGGTGT TCATGGTCGG CGAAGTGAAC
GACCAGACCG CCAACCTCGT GGTCGCGCAA TTGCTGTTCC TCGAGAGCGA GAATCCCGAC
AAGGACATCA GCCTCTACAT CAACAGCCCG GGCGGCTCGG TGTCGGCCGG GATGGCGATC
TACGACACGA TGCAGTTCAT CAAGCCGGAC GTGTCGACCC TGTGCATGGG CCTCGCGGCC
AGCATGGGCG CGTTCCTGCT CGCGTCGGGT GCGAAGGGCA AGCGCTTCGC GCTGCCGAAT
TCGCGCGTGA TGATTCACCA GCCGCTCGGC GGCGCGCGCG GCCAGGCATC CGACATCGAG
ATCCAGGCAC GCGAGATCCT CTACCTGAAG GAACGGCTGA ACAACCTGCT CGCGCAACAC
ACGGGCCAGG ACGTCGAACG CATCGCGCGC GACACCGACC GTGATAACTT CATGTCGAGC
GAGGACGCGA AGGCGTACGG GCTGATCGAC CAGGTGTTGT TGAAGCGCCC GTGA
|
|---|
| Protein sequence | MITRAELLDM LASNAPQGFE AQALGLVPIV VETSGRGERS YDIYSRLLKE RLVFMVGEVN
DQTANLVVAQ LLFLESENPD KDISLYINSP GGSVSAGMAI YDTMQFIKPD VSTLCMGLAA
SMGAFLLASG AKGKRFALPN SRVMIHQPLG GARGQASDIE IQAREILYLK ERLNNLLAQH
TGQDVERIAR DTDRDNFMSS EDAKAYGLID QVLLKRP
|
|---|
| |