Gene Bcen2424_1881 details

Gene Information

• Locus tag: Bcen2424_1881
• ID: 4448102
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia HI2424
• Kingdom: Bacteria
• Replicon accession: NC_008542
• Strand: +
• Start bp: 2087046
• End bp: 2087516
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 639693925
• Product: LysM domain/BON superfamily protein
• Protein accession: YP_835525
• Protein GI: 116689902
• COG category: [S] Function unknown
• COG ID: [COG1652] Uncharacterized protein containing LysM domain

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.168616
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTCTTC TTTCGTTTAT TAAAGAGGCG GGTGAAAAAC TGCTGGGTCA CGCCGATGCG 
CAAGCAGCGG AAGATCCGAA TGCCGCGAAC CAGACTGCGG CCGACGCAAT CAAGAATTAC 
ATCAGCTCGC AAGGTCTCGA TACGTCGAAC CTGACCGTCG CGTTCGACGG CGCATCGCGC 
ACCGTCACGC TGTCGGGCAG CGTCGCCGAT CTCGACACGA AGGCGAAGGT CAAGGTCGCG 
GCCGGCAACG TGCAGGGTGT CGCGGGCGTC AACGATGACG ATCTGCAGCC GGACGATCCG 
GAAGTGCAGT ACCACGACGT GAAGCCGGGC GACACGCTGT CGGCGATCGC CAAGGAAGTG 
TACGGCGATG CGAACAAGTA TCCGGTGATC TTCGAAGCGA ACAAGCCGAT GCTGTCGAGC 
CCGGACCGGA TCTACCCGGG CCAGAAGCTC GTGATTCCGC CGCAGTCCTG A 

 

Protein sequence

MGLLSFIKEA GEKLLGHADA QAAEDPNAAN QTAADAIKNY ISSQGLDTSN LTVAFDGASR 
TVTLSGSVAD LDTKAKVKVA AGNVQGVAGV NDDDLQPDDP EVQYHDVKPG DTLSAIAKEV 
YGDANKYPVI FEANKPMLSS PDRIYPGQKL VIPPQS