Gene Bcen2424_1866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_1866 
Symbol 
ID4448087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp2072514 
End bp2073605 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content69% 
IMG OID639693910 
ProductNLP/P60 protein 
Protein accessionYP_835510 
Protein GI116689887 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCGAA TCTGGGTTCC CGTCGCCGTC GTCTCCCTGC TTGCGGCCTG TTCCAGCGTG 
CCGCCGCAGT CGGCATCGCG TTCCGCTTCG GGGATGAAGA TCACGACGCC GCGCGCATTC
CCCGCGCCCG CCAATTTCCC GAAATTCGTC GACCACAGCG TCGGCCAGGA AGAAATCTCG
ATCCAGGCGA TGAGCCTCGT CGGCGTCCCG TATCGCTGGG GCGGCAACAC GCCGACGAGC
GGCTTCGACT GCAGCGGGCT CGTGCGCTAC GTGATCGGCC GCGCGGCCGA CGTGAACCTG
CCGCGCACGA CTGCCGACAT GAGCGGCCGC GGCGTATCGG TCGAACCCGA CGAGATCGCG
CCGGGCGACC TGATTTTCTT CAATACGACC GGACGGCCGC ATTCGCACGT CGGCATCTAT
GTCGGCAAGC TGCGCTTCGT CAACGCGCCG TCGACGGGCG GCACCGTACG GCTCGACTAC
CTGACGAACC CGTACTGGGC CAAGCGATTC GACGGCATTC GCCGCGTCGC GCCGCCGCGC
TCGGCCCCGA CGCCGTTCGA TGCGCCGACT TACGAGGCCA AGCGTGACGA GCCGCGTAAT
CCGCCGGTGG TCGCGGCCGC TCCGGTGGTC GTGACGGCTG CCGTCGCACA GCGGCAGCCC
GCGTATGCGT CGTCGCAAGC AAGAGCAACG CAGACACAGG CACCGGCCAT CCCGAGCACG
CCGGTCGTGA CGGCCGCCGC AGCTGCACCG GCAGCACCGG CCGCCGATCC GTATGAACCG
CCGCCACCGA GGATGCAGGC GGCCCAGCAG CAAGCCACGT CGGTGAATGA CGGCGCAACC
GCGATGGCGG CCAATGCAGG ACCGGCCGCG TCGGCGGAGG TCGGCACGCA GATTCCGACG
ACCGCGCTGA CGGCCGCCCA GGCTGCCGCC TTCGATGCAG AGCCGCCGCC CGCCACCGCG
TCGACGCCGG CACGCAGTAT CGAGCCCGCG CCCGTGCAGG TATTGCGTGC GTCGACGCAA
TCTGCACCCG TCAGCCCGCG CACGAGTACG GCGGACGATC CGATAGCACG GTTTGCGACC
GGCAGTTACT GA
 
Protein sequence
MLRIWVPVAV VSLLAACSSV PPQSASRSAS GMKITTPRAF PAPANFPKFV DHSVGQEEIS 
IQAMSLVGVP YRWGGNTPTS GFDCSGLVRY VIGRAADVNL PRTTADMSGR GVSVEPDEIA
PGDLIFFNTT GRPHSHVGIY VGKLRFVNAP STGGTVRLDY LTNPYWAKRF DGIRRVAPPR
SAPTPFDAPT YEAKRDEPRN PPVVAAAPVV VTAAVAQRQP AYASSQARAT QTQAPAIPST
PVVTAAAAAP AAPAADPYEP PPPRMQAAQQ QATSVNDGAT AMAANAGPAA SAEVGTQIPT
TALTAAQAAA FDAEPPPATA STPARSIEPA PVQVLRASTQ SAPVSPRTST ADDPIARFAT
GSY