| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1798 |
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| Symbol | |
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| ID | 4450942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | + |
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| Start bp | 1996696 |
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| End bp | 1999020 |
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| Gene Length | 2325 bp |
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| Protein Length | 774 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639693842 |
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| Product | RNA-binding S1 domain-containing protein |
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| Protein accession | YP_835442 |
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| Protein GI | 116689819 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGAAA CCGTAGCACT CAAGATCGTA CAGCGCATCG CCACCGAACT GTCCGTCCAG
CCGCGCCAGG TCGCGGCGGC CGTGCAACTC CTCGACGAAG GCTCGACCGT TCCGTTCATT
GCCCGGTACC GCAAGGAAGT GACCGGCAAC CTGGACGACA CGCAGCTGCG CAACCTCGAG
GAACGCCTCC TGTATCTGCG CGAACTCGAG GATCGCCGCG CCGCGATCCT GTCGAGCATC
GACGAACAGG GCAAGCTGAC CGACGAACTG CGTGCCGCGA TCGACGCGGC CGACAGCAAA
CAGGTGCTCG AAGACCTTTA TCTGCCGTAC AAGCCGAAGC GCCGCACGCG CGCACAGATC
GCCCGCGAAG CCGGCCTCGA GCCGCTCGCG CAGGCGCTGC TCGCGAACCC GCTGCTCGAC
CCGCAGGCCG AGGCGGCCGC GTATGTCGAC GCCGACAAGG GCGTCGCCGA CGTGAAGGCC
GCGCTCGACG GCGCGCGCGA CATCCTGTCC GAACAGTTCG GCGAGACGGC GGAACTGCTC
GGCAAGCTGC GCGACTACCT GCACAACCAG GGCGTCGTGT CGTCGGCCGT CGTCGAGGGC
AAGGAAAACG AGGAAGGCGA GAAATTCCGC GACTATTACG ACTACGCGGA AACGATCAAG
ACCGTGCCGT CGCACCGTGC GCTCGCGCTG TTCCGCGGCC GCAACGCCGG CGTGCTGACG
ATCAAGCTCG GCCTCGGCGA AGAGCTTGAC GCGCAGGTGC CGCATCCCGG CGAGGCGATG
ATCGCGCGCC ATTTCGGCAT CGCGAACCAG AATCGCCCGG CCGACAAATG GCTGTCCGAC
GTCTGCCGCT GGTGCTGGCG CGTGAAGGTG CAGCCGCATA TCGAGAACGA ACTGCTCACG
CAGCTGCGCG AAACGGCCGA AACCGAAGCG ATCCGCGTGT TCGCGCGCAA CCTGAACGAC
CTGCTGCTGG CCGCGCCGGC CGGCCCGAAG GCCGTGATCG GCCTCGACCC CGGCCTGCGT
ACGGGCGTGA AGGTCGCGGT CGTCGACCGC ACCGGCAAGG TGCTCGCGAC CGACACGATC
TACCCGCACG AGCCGCGCCG CGACTGGGAC GGCTCGATCG CGAAACTCGC GCGCATCGCC
GCGCAGACGC AGGCCGAGCT GATCAGCATC GGCAACGGCA CCGCATCGCG CGAAACCGAC
AAGCTCGCGA GCGAACTGAT CGCGAAACAC CCGGAGCTGC GCCTGCAGAA GATCGTCGTG
TCGGAGGCCG GCGCGTCGGT CTACTCGGCG TCCGAGCTCG CCGCGAAGGA ATTCCCGGAT
CTCGACGTGT CGCTGCGCGG CGCCGTGTCG ATCGCCCGCC GCCTGCAGGA CCCGCTCGCC
GAGCTCGTGA AGATCGAGCC GAAGGCGATC GGCGTCGGCC AGTACCAGCA CGACGTGAAC
CAGCGCGAAC TCGCCCGCTC GCTCGACGCG GTCGTCGAGG ATTGCGTGAA CGCGGTCGGC
GTCGACGCGA ACACCGCGTC GGCCCCGCTG CTCGCCCGCG TGTCGGGCCT GAACGCGACG
CTCGCGCGCA ACATCGTCGA CTATCGCGAT GCAAACGGCC CGTTCCCGTC GCGCGAGCAC
CTGCGCAAGG TGCCGCGCCT CGGCGACAAA ACTTTCGAAC AGGCCGCCGG CTTCCTGCGC
ATCAACGGCG GCGAGAACCC GCTCGACCGC TCGTCGGTGC ACCCGGAAGC GTATCCGGTC
GTCGAGCGGA TGCTCGCGAA GATCAACAAG CGCATCGACG ACGTGCTCGG CAACCGCGAA
GCGCTGTCGG GCCTGTCGCC GACGGAATTT GTTGACGAAC GTTTCGGCCT GCCGACCGTA
CGCGACATCC TCGCCGAACT GGAGAAACCG GGGCGCGATC CGCGTCCGGA ATTCAAGACG
GCCACGTTCC GCGAAGGCGT CGAGAAGGTC TCGGACCTCG TGCCGGGCAT GATGCTCGAA
GGCGTCGTGA CGAACGTCGC GGCGTTCGGC GCGTTCGTGG ATATCGGCGT GCACCAGGAC
GGCCTCGTCC ACGTGTCGGC GATGTCGACG AAGTTCATCA AGGACCCGCA CGAAGTCGTG
AAGGCCGGCC AGGTCGTCAA GGTGAAGGTG ATCGACGTCG ACGTGAAGCG CCAGCGCATC
GCGCTGACGA TGCGCCTCGA CGACGACGCG GCAGCGCCCG GCATGACGTC GCGCGGCGGC
CAGGATCGCG GCAATGCGGG GCGCGGCGCC GCCCGCCCGC AGCGTTCGCG CGAACCGGAG
CCGGCCGGCG CGATGGCCGC GGCATTCGCG AAGCTGAAGC GCTGA
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| Protein sequence | MTETVALKIV QRIATELSVQ PRQVAAAVQL LDEGSTVPFI ARYRKEVTGN LDDTQLRNLE
ERLLYLRELE DRRAAILSSI DEQGKLTDEL RAAIDAADSK QVLEDLYLPY KPKRRTRAQI
AREAGLEPLA QALLANPLLD PQAEAAAYVD ADKGVADVKA ALDGARDILS EQFGETAELL
GKLRDYLHNQ GVVSSAVVEG KENEEGEKFR DYYDYAETIK TVPSHRALAL FRGRNAGVLT
IKLGLGEELD AQVPHPGEAM IARHFGIANQ NRPADKWLSD VCRWCWRVKV QPHIENELLT
QLRETAETEA IRVFARNLND LLLAAPAGPK AVIGLDPGLR TGVKVAVVDR TGKVLATDTI
YPHEPRRDWD GSIAKLARIA AQTQAELISI GNGTASRETD KLASELIAKH PELRLQKIVV
SEAGASVYSA SELAAKEFPD LDVSLRGAVS IARRLQDPLA ELVKIEPKAI GVGQYQHDVN
QRELARSLDA VVEDCVNAVG VDANTASAPL LARVSGLNAT LARNIVDYRD ANGPFPSREH
LRKVPRLGDK TFEQAAGFLR INGGENPLDR SSVHPEAYPV VERMLAKINK RIDDVLGNRE
ALSGLSPTEF VDERFGLPTV RDILAELEKP GRDPRPEFKT ATFREGVEKV SDLVPGMMLE
GVVTNVAAFG AFVDIGVHQD GLVHVSAMST KFIKDPHEVV KAGQVVKVKV IDVDVKRQRI
ALTMRLDDDA AAPGMTSRGG QDRGNAGRGA ARPQRSREPE PAGAMAAAFA KLKR
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