| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1773 |
|---|
| Symbol | |
|---|
| ID | 4449445 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 1971408 |
|---|
| End bp | 1972109 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639693817 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_835417 |
|---|
| Protein GI | 116689794 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4619] ABC-type uncharacterized transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.057555 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCCC CCACCGGCCT CATCGACGCG CAGCACATCA CGCGGCGCGA CGCCAGCAGC
GGCAAGACGC TGCTCGCCCC GACCGATTTC AGCCTCGCCG CGGGATCGCG AATTGCTATC
ACCGGGCCAT CCGGGTCGGG CAAGAGCGTG CTGCTGCGCG CGCTCGCGCT GCTCGATCCG
CTCGACGGCG GTCACATCCT GTGGCGCGGC CGGCGGATCC GGCGCAGCGC GATTCCGCGC
TATCGGCGCA GCATCGCCTA TGTCCGCCAG CGCCCCGCGC AGATGGACGG CACCGTCGAA
GCGCAGTTGC GCTACCCGTA TTCGCTCGCG ATCTATCGCG ACGTCGCGTT CGACCGCGCC
CGCGCCGAAG CGCTCGCCGC GCAGGCCGGC CGCGGCGCCG GTTTTCTCGA CAAGCGCGCG
AGCGACCTGT CCGGCGGCGA AGCGCAGATC ACCGCGCTGC TGCGCGTGCT GCAACTCGAT
CCCGACGTCC TACTGCTCGA CGAGCCGACC TCCGCCCTTG ATCCCGAATC GGCGCGCGCG
ATCGAAGCGC TCGTCGGTGC GTGGTTCGAC GCGGCGCCCG ATGCGCGCGC CTACATGTGG
ATCTCGCACG ATCCGGCCCA GGCCGCGCGA ATCGCCACGA TGCGGCTCGT GATGCAGGCC
GGCGTCCTGC ACGCGGCCAA CCCGACGGAG GCTGCGCAAT GA
|
|---|
| Protein sequence | MTSPTGLIDA QHITRRDASS GKTLLAPTDF SLAAGSRIAI TGPSGSGKSV LLRALALLDP
LDGGHILWRG RRIRRSAIPR YRRSIAYVRQ RPAQMDGTVE AQLRYPYSLA IYRDVAFDRA
RAEALAAQAG RGAGFLDKRA SDLSGGEAQI TALLRVLQLD PDVLLLDEPT SALDPESARA
IEALVGAWFD AAPDARAYMW ISHDPAQAAR IATMRLVMQA GVLHAANPTE AAQ
|
|---|
| |