Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_1744 |
Symbol | |
ID | 4449434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | - |
Start bp | 1939135 |
End bp | 1940517 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639693788 |
Product | sigma-54 dependent trancsriptional regulator |
Protein accession | YP_835388 |
Protein GI | 116689765 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCCGC ACGACACCAT TCCGATCGTC CCTGTTCCGC GCCGCGACGC GATGCCCGAC GTGCGCGCGC TCGTCGCGTA TCTCGAGCAG GACCCGCAGC CGATGATCGT GGTCGACCCC GACTACCGCA TCCTCGCGGC GAACGATGCG TACCGGCGTC AGTTCGGCGT GGCCGGCGTC GAGCACGTGG GCCGGCACTG TTTCCAGGTG TCGCATCACT ACGACGTGCC GTGCGACCAG GCCGGCGAGC ATTGCCCGAT GAAGCAGGCG CTCGAGTCGC GCGGGCTGAA CCGCGTGCTG CACATCCATC ACACGCCGCG CGGCCCCGAG CATGTCGACG TTGAGCTGCG GCCGATCTTC GATGCACACG GCAACGTGAT CGCGTACGTC GAGCGGCTGA CGACCGTGCG CAGCGCGTCC GCGCAGCCGA GCGCGGAAGG GCTCGTCGGC GGCTCCGATG CGTTCAACGC GGCGCTCGGC GCGTTGCAGC GCGTGGCGCC GTCGACACTG CCGGTGTTGC TGCTCGGCGA ATCGGGCACC GGCAAGGAGC TGTTTGCCCG CGCGCTGCAC GAGGCGAGCG ACCGCGCGAT GGGGCCGTTC GTCGTCGTCG ATTGCTCGGG GATCGCCGAG ACGCTGTTCG AGAGCGAACT GTTCGGCTAC GAGAAGGGCG CGTTCACCGG CGCGAACCAG CGCAAGCCGG GCCTCGTCGA AACCGCGCAG GGCGGCACGC TGTTTCTCGA CGAGATCGGC GACGTGCCGC TGCCGATGCA GGTGAAGCTG CTGCGGCTGA TCGAATCGGG CACGTTCCGG CGCGTGGGCG GCGTCGAGGC GCTGCGTGCG GATTTCCGGC TGGTCGCGGC CACGCACAAG CCGCTGCGCG AGATGATCGA CGACGGTCGG TTCCGGCAGG ATCTTTACTA CCGGATCAAC GCGTTTCCGA TCCCGCTGCC GGCGCTGCGC GAACGGCAGG GCGACGTCGC GCTGCTGGCT GAATCGATCC TGCGGCGGAT CGCAAACGCG CGCGGCAAGG CGGGCGACGC GAGTGCGCGG CCGTTCATGC TGACCGAGCG CGCAAGAGCG TGCCTCGACG CGTATGCATG GCCCGGCAAC ATCCGCGAGC TGCGCAACGT GCTCGAACGC GCGTGCCTGT TCGCCGACGA CGGGACGATC CGCGTCGAGC ATCTGCCGGC CGAACTCGTC GCGGCAGCGG CGGCGCCCCA CGCGCAAGCG GCGGACGTGC GCGGCGTGTC GGATGCCGAG CTGGTTCGTA TCGCGCGCAC GTTCGACGGC ACGCGCAAGG CGCTGGCCGA GCAACTCGGA TTGAGCGAGC GGACACTGTA CCGGCGGATG AAGGCGCTAG GCCTCGGCTC GCGCGAGCGC TGA
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Protein sequence | MNPHDTIPIV PVPRRDAMPD VRALVAYLEQ DPQPMIVVDP DYRILAANDA YRRQFGVAGV EHVGRHCFQV SHHYDVPCDQ AGEHCPMKQA LESRGLNRVL HIHHTPRGPE HVDVELRPIF DAHGNVIAYV ERLTTVRSAS AQPSAEGLVG GSDAFNAALG ALQRVAPSTL PVLLLGESGT GKELFARALH EASDRAMGPF VVVDCSGIAE TLFESELFGY EKGAFTGANQ RKPGLVETAQ GGTLFLDEIG DVPLPMQVKL LRLIESGTFR RVGGVEALRA DFRLVAATHK PLREMIDDGR FRQDLYYRIN AFPIPLPALR ERQGDVALLA ESILRRIANA RGKAGDASAR PFMLTERARA CLDAYAWPGN IRELRNVLER ACLFADDGTI RVEHLPAELV AAAAAPHAQA ADVRGVSDAE LVRIARTFDG TRKALAEQLG LSERTLYRRM KALGLGSRER
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