Gene Bcen2424_1685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_1685 
Symbol 
ID4449213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp1874020 
End bp1875099 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content68% 
IMG OID639693730 
ProductABC transporter related 
Protein accessionYP_835330 
Protein GI116689707 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCACA ATTTCGAACG GTTGCGGCTC GACGGCGTGT GCCGCAGTTT TACCAATACG 
GAAGGCGCGC AAGTCGCCGC GCTGAACGGG CTCGACCTCG AGATCCGGCG CGGCGAGTTC
ATCGCGCTGC TCGGCCCGTC GGGCTGCGGC AAATCGACCG CGCTGAACTG CATCGCGGGG
CTGCAGCCGC TCACGCGCGG CGGCATCTGG CTCGACGACA CACGCATCGA CGTGCTGCCG
CCCGAGCGTC GCGGCTTCGG GATGGTGTTC CAGAACTACG CGCTGTTTCC GCACATGTCG
GTGCTCGACA ACGTCGGCTT CGGCCTCAAG ATGCGCGGCG TGGCGAAGCA GGAAACGCGG
CGGCGCGCGC AGCAGGCGCT CGAACTCGTG CAGCTCGTCG GCCACGAGGG CAAGCTGCCC
GGGCAACTGT CGGGCGGGCA GCAGCAGCGC GTCGCGATCG CGCGCGCGAT CGTGATCGAG
CCGCCGCTCG TGCTGATGGA CGAACCGCTG TCGAACCTCG ACACCAAACT GCGCATCGAG
ATGCGCGCGG AAATTCGCCG CATCCACACG CAGCTCGAAC GCGCGACGAT CTACGTGACG
CACGACCAGG ACGAGGCGCT GTCGATGGCC GACCGCATCG TCGTGATGAA GGAGGGCGTC
GTGCAGCAGG TCGCGTCGCC GAAGGACGTC TACACGCGCC CGCACAACCT GCATGTCGCG
CGCTTCATGG GCTATCGCAA CGTGCTGCCG TTTACGCTCG AAGGGATGGC CGGCGATTAC
GTGAACGTTA CGTCGGGCGG CGTGCGCCTC ACCGGCGTAC CGATGGCCGG CTTCGACGCG
AAGGACGTCG TGGTCGCGCT GCGTCCGGAC GACATCGAGC GCGCGGAAGC CGGTGCCGAC
AATGCGTTCG ACGCGACCGT CGAGACGGTC GAGTACGGCG GCCGCGACTC GCTGATCCGC
GCGATCACGC CGTTCGGTTC GATCTGGGCG CGCGTGGCCG GCGAGTTCAC GGAAGGTGAA
CCGCTGCGGC TACGCGTGGC GCCGGCGCGC ACGCTCGTCT ATGCGGGAGA CGGGCAATGA
 
Protein sequence
MKHNFERLRL DGVCRSFTNT EGAQVAALNG LDLEIRRGEF IALLGPSGCG KSTALNCIAG 
LQPLTRGGIW LDDTRIDVLP PERRGFGMVF QNYALFPHMS VLDNVGFGLK MRGVAKQETR
RRAQQALELV QLVGHEGKLP GQLSGGQQQR VAIARAIVIE PPLVLMDEPL SNLDTKLRIE
MRAEIRRIHT QLERATIYVT HDQDEALSMA DRIVVMKEGV VQQVASPKDV YTRPHNLHVA
RFMGYRNVLP FTLEGMAGDY VNVTSGGVRL TGVPMAGFDA KDVVVALRPD DIERAEAGAD
NAFDATVETV EYGGRDSLIR AITPFGSIWA RVAGEFTEGE PLRLRVAPAR TLVYAGDGQ