Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_1628 |
Symbol | |
ID | 4448829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008542 |
Strand | + |
Start bp | 1796492 |
End bp | 1797283 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639693673 |
Product | pili assembly chaperone |
Protein accession | YP_835273 |
Protein GI | 116689650 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.254202 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCGGC CGCGCGGGGC GAACGATGAT TTCACGGACC CAGCGATGAA GCATTCCTTT TCCCTTTCCT TCCCGCGGCG CGCGCTGTGC GCGTTCGCGA CCGTCGGTGC GCTGCTTGCC GGCGCCGCCC ATGCGGCGAT CGTGCCCGAT CGCACGCGCG TGATCTTCAA CGAAGGCGAA CAGGCCGCGA TCGTGACGAT CACCAACAAG AGCACGACGT ATCCGTATCT CGTGCAGTCG TGGCTCGAAG ATGCGAACGG CAACAAGATC ACGTCGCCGC TGATGGTCGT GCCGCCGCTG CAGCGGGTCG AGGCGAACGA GCGCAACGTG CTGCGGATCG CGAAGCTGCC CGGTACGCAA CTGCCGGCCG ATCGCGAAAC GGTGTTCTAC CTGAACATCC GCGAAGTGCC GCCGAAGACG GATACGCCGA ACACGCTGCA GATCGCGCTG CACACGCAGA TGAAGCTGTT CTACCGGCCG AAGGCCGTGC AGCCCGCGCG CGACGAGGAC TGGACGCTGC CGATGACGCT GCGGGTGGAT GCGGCCGCGC ACAAGCTGGT GTTCGACAAT CCGACGCCTT ACCACGTGAC GGTGGTCGAC GTGAGCGCGG GCGCGCAGAA GACGCCGGTG CCGATCGAGC CGGTCATGGT GAGCCCGATG AGCACGGCCG ACGTGCCGTT CAAGGCCGCG ACGCCGTCGA CGCTGTTCGT CACGCACATC GACGACTACG GCGGCCAGGT GGCGGTCGAG TATGCGTGCG AGGCCGGTGC GTGCAAGAGC GTGAAGAAAT GA
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Protein sequence | MQRPRGANDD FTDPAMKHSF SLSFPRRALC AFATVGALLA GAAHAAIVPD RTRVIFNEGE QAAIVTITNK STTYPYLVQS WLEDANGNKI TSPLMVVPPL QRVEANERNV LRIAKLPGTQ LPADRETVFY LNIREVPPKT DTPNTLQIAL HTQMKLFYRP KAVQPARDED WTLPMTLRVD AAAHKLVFDN PTPYHVTVVD VSAGAQKTPV PIEPVMVSPM STADVPFKAA TPSTLFVTHI DDYGGQVAVE YACEAGACKS VKK
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