| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1503 |
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| Symbol | |
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| ID | 4448622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | - |
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| Start bp | 1658330 |
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| End bp | 1659889 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639693543 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_835148 |
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| Protein GI | 116689525 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.177807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACAGG CTCCTGCCTC CTACCCGCCC TTGCAGGGCG GGCAACTCGT ACTCGGGACG
ATCGCGGTGT CGCTCGCGGT GTTCATGAAC GTGCTCGACA CGTCCATCGC GAACGTCGCG
ATCCCGACCA TCTCGGGCGA CCTCGGCGTG TCGTCCGACC AGGGCACGTG GGTCATCACG
TCGTTCGCGG TCGCGAACGC CATCTCGGTG CCGCTGACCG GCTGGCTGAC CGACCGTTTC
GGGCAGGTGC GCCTGTTCCT CGCGTCGATC ATCCTGTTCG TCATCTCGTC GTGGATGTGC
GGGCTGTCGC CGAACCTGCC GTTCCTGCTC GGCTCGCGCG TGCTGCAGGG CGCGGTCGCC
GGCCCGATGA TTCCGCTGTC GCAAGCGCTC CTGCTGTCGA GCTATCCGCG CGCGAAAGCA
CCGATGGCGC TCGCGCTATG GGCGATGACG ACGCTGATCG CGCCGGTCGC GGGCCCGATT
CTCGGCGGCT GGATCTCGGA CAACTACTCG TGGCCGTGGA TCTTCTACGT CAACATCCCG
GTCGGCATCG CCGCCGCCGC CGCGACGTGG ATGATCTATC GCAACCGGGA GTCGGCCGTG
CGCCGCGCGC CGATCGACGG CGTGGGCCTC GCGCTGCTGG TCGTCTGGGT CGGCTCGCTG
CAGATCATGC TCGACAAGGG CAAGGATCTC GACTGGTTCG CATCGACGAC CATCGTCGTG
CTCGCGCTGA CCGCCGTCAT TGCATTCGCG TTCTTCGTGA TCTGGGAGCT GACCGCCGAG
CACCCGGTCG TCGACCTGTC GCTGTTCCGC ATCCGGAACT TCACCGGCGG CACGGTCGCG
CTGTCGATCG GGTACGGCCT GTACTTCGGC AACCTCGTGC TGTTGCCGCT GTGGCTGCAG
ACGCAGATCG GCTACACCGC GACCGACGCC GGTCTCGTGA TGGCGCCGGT CGGGCTGTTC
GCCATCCTGC TGTCGCCGCT CACCGGGAAG TATCTGCCGC GCACCGATCC GCGCTTCATC
TCGACGGCGT CGTTCCTGAC GTTTGCGCTG TGCTTCTGGA TGCGTTCGCG CTACACGACG
GGCGTCGACG AATGGTCGCT GACGCTGCCG ACGCTCGTGC AGGGCATCGC GATGGCGGGC
TTCTTCATCC CGCTCGTGTC GATCACGCTG TCCGGCCTGC CCGGCCCCCG CATTCCTGCG
GCGTCCGGCC TGTCGAACTT CGTGCGGATC ATGTGCGGCG GCATCGGCAC GTCGATCTTC
CAGACCGCGT GGGACCACCG CAACAACTTC CATCACGCGC AACTGGTCGA GCAGGCGAAC
CCGTACAACC CGACGTTCAA CCAGGCCGTC ACGCAGATGG GCAACCTCGG GCTGTCGCAG
AGCCAGGCAC ACGGGCTCAT CAACAACATG GCCACGCAAC AGGCCGCGCA ACTCGGCGTG
AACGATCTGT TCTATATCTC GGCGGTGATC TTCGTGCTGC TGATCGCACT GATCTGGATC
ACCAAGCCCG AACGCGCGGG CGGCGGCGAT GCCGGTGCGG CGGCGTCGGC AGCGCACTGA
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| Protein sequence | MAQAPASYPP LQGGQLVLGT IAVSLAVFMN VLDTSIANVA IPTISGDLGV SSDQGTWVIT
SFAVANAISV PLTGWLTDRF GQVRLFLASI ILFVISSWMC GLSPNLPFLL GSRVLQGAVA
GPMIPLSQAL LLSSYPRAKA PMALALWAMT TLIAPVAGPI LGGWISDNYS WPWIFYVNIP
VGIAAAAATW MIYRNRESAV RRAPIDGVGL ALLVVWVGSL QIMLDKGKDL DWFASTTIVV
LALTAVIAFA FFVIWELTAE HPVVDLSLFR IRNFTGGTVA LSIGYGLYFG NLVLLPLWLQ
TQIGYTATDA GLVMAPVGLF AILLSPLTGK YLPRTDPRFI STASFLTFAL CFWMRSRYTT
GVDEWSLTLP TLVQGIAMAG FFIPLVSITL SGLPGPRIPA ASGLSNFVRI MCGGIGTSIF
QTAWDHRNNF HHAQLVEQAN PYNPTFNQAV TQMGNLGLSQ SQAHGLINNM ATQQAAQLGV
NDLFYISAVI FVLLIALIWI TKPERAGGGD AGAAASAAH
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