Gene Bcen2424_1473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_1473 
Symbol 
ID4448174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand
Start bp1626121 
End bp1628358 
Gene Length2238 bp 
Protein Length745 aa 
Translation table11 
GC content68% 
IMG OID639693511 
Product(p)ppGpp synthetase I, SpoT/RelA 
Protein accessionYP_835118 
Protein GI116689495 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID[TIGR00691] (p)ppGpp synthetase, RelA/SpoT family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0014242 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAAT CCGTTTCCGC CTCTCCCGTC GCGGCGCCGT CGTTCGACGA CGTGCTCGCG 
TTCGTGCGCG AGCGGGCCGG CGACGCGCGC CTGTCGTCCG GCGAGCTGCT CGCCGATCAC
TCGGCGGGCA CGGCGGCGAT CATGCGCACG CTGAACGTCG ATCCGCACGC GATGCAGGCC
GCCGCGCTGT TCGTGCTGAC GCCGCACCTG AGCGACCCCG AGCGCGAGCT GACCGAGCGT
TTCGGCGACG AAGTCGCGCG GCTCGTGTCC GACGTGCGCA AGCTGTTGCG GCTCGGCACC
GTCAGCCTGC GCGCCGCGCA GAATGCCGCG AAGCCCGACT CCGGGCGCGA CGCGGCGGAA
GAGCGGCGCA CGCAAATCGA GGCGCTGCGC AAGATGCTGC TCGCCTTCGC GCAGGACATC
CGCGTGGTGC TGATCCGGCT CGCGTCGCGG TTGCAGTCGC TGCGCTACTA CGCGGCCGCG
AAGCTCGATC CGCCGCCCGA CGTCGCGCGC GAGACGCTGG AGATCTATGC GCCGCTCGCG
AACCGTCTCG GCATCTGGCA ACTGAAGTGG GAGCTCGAGG ATCTCGCGTT CCGCTTCGAG
GATCCCGTCA CCTACAAGCG GATCGCGAAG CTGCTCGACG AGAAGCGCAT CGAGCGCGAG
GCGTACGTCA CGCAGGCGAT CGCGCGGCTG CAGCACGAGC TCGCGCAAGC GCACATCCAG
GCCGACGTGA GCGGCCGGCC GAAGCATATC TACAGCATCT GGCGCAAGAT GCGCGGCAAG
GAGCTCGACT TCTCCGAGCT GTACGACGTG CGCGCGTTTC GCGTGATCGT GCCCGACATC
AAGGATTGCT ACGCGGTGCT GGGCATCGTG CATCACCTGT GGCAGCCGGT GCCGAAGGAA
TTCGACGACT ACATCTCGCG GCCGAAGCCG AACGGCTACA AGTCGCTGCA TACGGTCGTG
ATCGGCGACG ACGGCCGTGC GTTCGAAGTG CAGATCCGCA CGCAGGAGAT GCATCGTTTC
GCCGAGTACG GCGTCGCCGC GCACTGGCGC TACAAGGAGG CCGGCGCGCG CGGCTACGGC
GGCCAGTTCT CCGCGAGCGA CAAGTACGAC GAGAAGATCG CGTGGCTGCG CCAGTTGCTC
GCGTGGAAGG ACGACGTCGA GGACGGCACC GAAGTGTCGG GCGACCAGGC GTGGGCGCAA
TTGCGCGAGA CGTCGCTCGA CGACGACCAC ATCTATGTAC TGACGCCGCA GGCGCGCGTG
ATCGCGTTGC CGCAGGGCGC GACGCCGGTC GATTTCGCGT ATCACCTGCA TAGCGAGCTC
GGCCATCGCT GCCGTGGCGC GCGCGTCGAC GGCGTGATGG TGCCGCTGAA CACGTCGCTG
GCGAACGGCC AGACGGTCGA GATCGTCGCG GTGAAGGAAG GCGGGCCGTC GCGCGACTGG
CTGAACCTGC AGCTCGGTTA CCTGAAGAGC TCGCGCGCGC GGCAGAAGGT GCGTGCGTGG
TTCAACTCGA TCGAGCAGGA AGAAAACGTC GCGCACGGGC GCGCGCTCGT CGAAAAGACG
CTGCAGCGCG AGGGCAAGAC GTCGGTCAAC CTGGACAACC TCGCCGCGAA GCTCGGCTTC
AAGTCGCCCG AGGAGTTGTT CTCGGTCGTC GGCAAGGAAG AATTCAGCCT GCGCAACGTC
GAGCACGCGC TGTCCGATGC GCCGCCGCCG GAACCGGCGC CCGAGGCGCC GGCCGATTTC
GAGAAGCGCA GCAGCGGCGC GAGCGTCGCG CACGGCGCGT CGACCGGCGT GCTGGTGGTG
GGCGTCGACG CGCTGCTGAC GCAGTTGGCG CGCTGCTGCC GTCCGGCGCC GCCCGATCCG
ATCAGCGGTT TCGTCACGCG CGGCAAGGGA ATGTCGATTC ATCGCAGCGA CTGCCCGACG
TTTCGCCGGA TGGTCGAGCG CGCGCCGGAG CGCGTGCTGC AGACGACCTG GTCGGCCGAC
GTGCTGGGCG GGCGCGGCGC GTCCGTGTAT CCGGTCGACC TGATGATCGA GGCGAGCGAC
CGGCAAGGGT TGCTGCGCGA TATCTCCGAA GTGTTCGCAC GCGAAAAGAT CAATGTCGTG
GGCGTGAAGA CGCAGAGTCG CCGCAATGCG GCATTCATGC AGTTCACGGT CGAGGTATCG
AATTCGGCGC AGGTGCAGCG CGCGTGCACG CTGCTCGGCG AGGTGCAGGG CGTCGTGCGG
GCAGGGCGGA AATCGTGA
 
Protein sequence
MTESVSASPV AAPSFDDVLA FVRERAGDAR LSSGELLADH SAGTAAIMRT LNVDPHAMQA 
AALFVLTPHL SDPERELTER FGDEVARLVS DVRKLLRLGT VSLRAAQNAA KPDSGRDAAE
ERRTQIEALR KMLLAFAQDI RVVLIRLASR LQSLRYYAAA KLDPPPDVAR ETLEIYAPLA
NRLGIWQLKW ELEDLAFRFE DPVTYKRIAK LLDEKRIERE AYVTQAIARL QHELAQAHIQ
ADVSGRPKHI YSIWRKMRGK ELDFSELYDV RAFRVIVPDI KDCYAVLGIV HHLWQPVPKE
FDDYISRPKP NGYKSLHTVV IGDDGRAFEV QIRTQEMHRF AEYGVAAHWR YKEAGARGYG
GQFSASDKYD EKIAWLRQLL AWKDDVEDGT EVSGDQAWAQ LRETSLDDDH IYVLTPQARV
IALPQGATPV DFAYHLHSEL GHRCRGARVD GVMVPLNTSL ANGQTVEIVA VKEGGPSRDW
LNLQLGYLKS SRARQKVRAW FNSIEQEENV AHGRALVEKT LQREGKTSVN LDNLAAKLGF
KSPEELFSVV GKEEFSLRNV EHALSDAPPP EPAPEAPADF EKRSSGASVA HGASTGVLVV
GVDALLTQLA RCCRPAPPDP ISGFVTRGKG MSIHRSDCPT FRRMVERAPE RVLQTTWSAD
VLGGRGASVY PVDLMIEASD RQGLLRDISE VFAREKINVV GVKTQSRRNA AFMQFTVEVS
NSAQVQRACT LLGEVQGVVR AGRKS